Pairwise Alignments

Query, 345 a.a., type IV pili twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., Twitching motility protein PilT from Pseudomonas fluorescens FW300-N2E2

 Score =  271 bits (693), Expect = 2e-77
 Identities = 136/333 (40%), Positives = 207/333 (62%)

Query: 1   MDIAELLEFSVKHNASDLHLSAGVPPMVRIDGEVRKLGVPAFTHSDVHRLIFEIMNDAQR 60
           M+I  LL      N SDL++S G PP  R +G ++ LG  AF   D+ RL   +M+  QR
Sbjct: 25  MEIDPLLRILASQNGSDLYMSTGAPPCARFEGVLKPLGNEAFKVGDIARLAGSLMDAEQR 84

Query: 61  SEYEEKLEVDFSFELPNVGRFRVNAFHQARGCSAVFRTIPTVIPTLEQLDAPEIFSKIAN 120
            E++ +LE++ +  L  VGRFRVN F Q    S V R +   IP  E L  P +      
Sbjct: 85  LEFDRELEMNLAISLAGVGRFRVNIFKQRNDVSMVIRNVKLDIPRFEDLKLPRVLLDTIM 144

Query: 121 YEKGLVLVTGPTGSGKSTTLAAMVNYVNAHHNKHILTIEDPIEFVHSNNKCLINQREVHR 180
            ++GL+L  G TGSGKST+LAA+++Y N + + HI+TIEDP+E++H + K +INQREV  
Sbjct: 145 QKQGLMLFVGATGSGKSTSLAALIDYRNRNSSGHIITIEDPVEYIHRHKKSIINQREVGV 204

Query: 181 DTHSFKNALRSALREDPDVILVGELRDQETISLALTAAETGHLVFGTLHTSSAAKTIDRI 240
           DT SF  AL++ LR+ PDV+L+GE+RD+ET+  AL  A+TGHLV  TLH  +A + +DR+
Sbjct: 205 DTRSFHAALKNTLRQAPDVVLIGEIRDRETMEHALAFADTGHLVISTLHAHNANQALDRV 264

Query: 241 IDVFPGSDKDMVRSMLSESLRAVIAQKLLKRVGGGRVACHEIMLATPAIRNLIREDKVAQ 300
           I+ FP   +  + + L  +L+A ++Q+L++   G R A  E+ML +P + +LIR +++ +
Sbjct: 265 INFFPEERRPQLLNDLGNNLKAFVSQRLVRTRTGQRRAAVEVMLGSPTVADLIRRNELGE 324

Query: 301 MYSIIQTGAAHGMQTMEQNAKQLIARGVVDAQE 333
           +  I++     GMQT +     L+  G +D +E
Sbjct: 325 LKGIMEKSEELGMQTFDHALFNLVVEGAIDEEE 357