Pairwise Alignments

Query, 345 a.a., type IV pili twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., twitching motility protein from Synechococcus elongatus PCC 7942

 Score =  319 bits (817), Expect = 8e-92
 Identities = 168/340 (49%), Positives = 223/340 (65%), Gaps = 5/340 (1%)

Query: 3   IAELLEFSVKHNASDLHLSAGVPPMVRIDGEVRKLGVPAFTHSDVHRLIFEIMNDAQRSE 62
           I +L+E  V+   SDLHLS G+PP  RI G++  +G          RLIF ++N+ QR  
Sbjct: 5   IEDLMEKLVEMGGSDLHLSVGLPPYFRISGKLTPIGDEPMGEEQCQRLIFSMLNNTQRKM 64

Query: 63  YEEKLEVDFSFELPNVGRFRVNAFHQARGCSAVFRTIPTVIPTLEQLDAPEIFSKIANYE 122
            E+  E+D S+ +  + RFRVN +      +A  R +   +P    L  P++  +++   
Sbjct: 65  LEQNWELDCSYGIRGLARFRVNVYKDKGTYAACLRALSAKVPEFNDLGLPQVVREMSEKP 124

Query: 123 KGLVLVTGPTGSGKSTTLAAMVNYVNAHHNKHILTIEDPIEFVHSNNKCLINQREVHRDT 182
           +GL+LVTGPTGSGK+TTLAA++  +N    +HI+T+EDPIEFV+   K +I+QR++  DT
Sbjct: 125 RGLILVTGPTGSGKTTTLAAVIELINRSRAEHIITVEDPIEFVYQPAKSIIHQRQLGEDT 184

Query: 183 HSFKNALRSALREDPDVILVGELRDQETISLALTAAETGHLVFGTLHTSSAAKTIDRIID 242
            SF NALR+ALREDPD+ILVGE+RD ETI LA+TAAETGHLVFGTLHTSSAA+T+DRIID
Sbjct: 185 KSFANALRAALREDPDIILVGEMRDLETIQLAITAAETGHLVFGTLHTSSAAQTVDRIID 244

Query: 243 VFPGSDKDMVRSMLSESLRAVIAQKLLKRVGG-----GRVACHEIMLATPAIRNLIREDK 297
           VFP   +  VR  LS SL AV +Q L+++        GRV   EIM+ TPAI NLIRE K
Sbjct: 245 VFPAEKQTQVRVQLSNSLIAVFSQTLVQKRNARPGSFGRVLAQEIMIVTPAISNLIREGK 304

Query: 298 VAQMYSIIQTGAAHGMQTMEQNAKQLIARGVVDAQEVQSK 337
            AQ+YS IQTG   GMQT+E+    L   G +  +   SK
Sbjct: 305 TAQIYSQIQTGGKLGMQTLEKALADLYKAGEITFEAAASK 344