Pairwise Alignments

Query, 345 a.a., type IV pili twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., twitching motility protein PilT (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  501 bits (1290), Expect = e-146
 Identities = 243/337 (72%), Positives = 292/337 (86%)

Query: 1   MDIAELLEFSVKHNASDLHLSAGVPPMVRIDGEVRKLGVPAFTHSDVHRLIFEIMNDAQR 60
           M+I ELL FSVKH ASDLHLSAG+ PM+R+DGEVRK+ +PA  H  VH L+++IMND QR
Sbjct: 1   MEITELLAFSVKHKASDLHLSAGISPMIRVDGEVRKINLPALDHQGVHSLVYDIMNDKQR 60

Query: 61  SEYEEKLEVDFSFELPNVGRFRVNAFHQARGCSAVFRTIPTVIPTLEQLDAPEIFSKIAN 120
            ++EE LE+DFSFE+PN+ RFRVNAF+Q+RG +AVFRTIP+ I +LEQL APEIF KI++
Sbjct: 61  KDFEEHLEIDFSFEVPNLARFRVNAFNQSRGAAAVFRTIPSDILSLEQLGAPEIFKKISS 120

Query: 121 YEKGLVLVTGPTGSGKSTTLAAMVNYVNAHHNKHILTIEDPIEFVHSNNKCLINQREVHR 180
           + +GLVLVTGPTGSGKSTTLAAMV+Y+N + + HILTIEDPIEFVH N +CLINQREVHR
Sbjct: 121 FPRGLVLVTGPTGSGKSTTLAAMVDYINENRHDHILTIEDPIEFVHQNKQCLINQREVHR 180

Query: 181 DTHSFKNALRSALREDPDVILVGELRDQETISLALTAAETGHLVFGTLHTSSAAKTIDRI 240
            THSF  ALRSALREDPDVILVGE+RD ETI LA+TAAETGHLVFGTLHT+SAAKTIDR+
Sbjct: 181 HTHSFNAALRSALREDPDVILVGEMRDLETIRLAMTAAETGHLVFGTLHTTSAAKTIDRV 240

Query: 241 IDVFPGSDKDMVRSMLSESLRAVIAQKLLKRVGGGRVACHEIMLATPAIRNLIREDKVAQ 300
           +DVFP  +KDMVR+MLSESL+AVI+Q L+K++GGGRVA HEIM+ TPAIRNLIREDKVAQ
Sbjct: 241 VDVFPAGEKDMVRTMLSESLQAVISQTLIKKIGGGRVAAHEIMMGTPAIRNLIREDKVAQ 300

Query: 301 MYSIIQTGAAHGMQTMEQNAKQLIARGVVDAQEVQSK 337
           MYS IQTG AHGMQT+EQ  + L+ RG++  ++  +K
Sbjct: 301 MYSAIQTGMAHGMQTLEQCLQNLVNRGLITREDAMAK 337