Pairwise Alignments

Query, 353 a.a., adenine DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., A/G-specific adenine glycosylase from Pseudomonas stutzeri RCH2

 Score =  343 bits (879), Expect = 5e-99
 Identities = 170/341 (49%), Positives = 231/341 (67%), Gaps = 6/341 (1%)

Query: 4   FAQAILTWYDAYGRKNLPWQQNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHAL 63
           F  A+L W+D++GRK+LPWQQ    YRVW+SEIMLQQTQV+TV+ YF+RF++  P+V AL
Sbjct: 6   FGTAVLDWFDSHGRKDLPWQQGITPYRVWVSEIMLQQTQVSTVLGYFDRFMDALPSVEAL 65

Query: 64  AAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAV 123
           AAA +DEVLH WTGLGYY+RARNLHK A+++V E+GG FP D++++  LPG+GRSTA A+
Sbjct: 66  AAAEEDEVLHLWTGLGYYSRARNLHKTAKLIVVEHGGVFPADVDKLAELPGIGRSTAGAI 125

Query: 124 LSSVYKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMM 183
            S        ILDGNVKR LAR  A +G+PG+  V  QLW  AE  TP+  V+ Y QAMM
Sbjct: 126 ASISLGLRAPILDGNVKRVLARYVAQQGYPGEPKVARQLWEVAERFTPQQRVNHYTQAMM 185

Query: 184 DMGAMICTRSKPKCSLCPVESFCLAKQQGNPQEYPGKKPKTDKPVKATWFVMLYH-DNAV 242
           D+GA +CTRS+P C LCP++  C A   G   ++P  KP+   P K T   +L + D A+
Sbjct: 186 DLGATLCTRSRPSCLLCPLKDGCRAHLLGRETDFPVPKPRKALPQKRTLMPLLANRDGAI 245

Query: 243 WLEQRPQSGIWGGLYCFPQ-SEIANIQTTIDQRAIGDSTITSQKTLIAFRHTFSHYHLDI 301
            L +RP +G+WGGL+  P+  ++A +    ++ A+    +  ++ L    HTFSH+ L I
Sbjct: 246 LLYRRPSTGLWGGLWSLPELDDLAALDPLAERHAL---QLEERRELPGLTHTFSHFQLAI 302

Query: 302 TPILLQLSRKPDIVMEGSKGLWYNLSHPDEIGLAAPVKQLL 342
            P L+++   PD V E +  LWYNL+ P  +GLAAPVK LL
Sbjct: 303 EPWLIRVKSAPDAVAE-ADWLWYNLATPPRLGLAAPVKTLL 342