Pairwise Alignments

Query, 353 a.a., adenine DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., A/G-specific adenine glycosylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  400 bits (1028), Expect = e-116
 Identities = 196/346 (56%), Positives = 245/346 (70%), Gaps = 6/346 (1%)

Query: 3   PFAQAILTWYDAYGRKNLPWQQNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHA 62
           PF + I+ WYD +GRK+LPWQQNK  Y+VW+SEIMLQQTQVATVIPYFERF+  FPTV+ 
Sbjct: 9   PFGKRIVLWYDKHGRKSLPWQQNKTPYKVWVSEIMLQQTQVATVIPYFERFMASFPTVND 68

Query: 63  LAAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAA 122
           LA A +DEVLH WTGLGYYARARNLHKAAQ++  E+GGEFPT+ + + ALPG+GRSTA A
Sbjct: 69  LANAHEDEVLHHWTGLGYYARARNLHKAAQLIRDEHGGEFPTEFDAVLALPGIGRSTAGA 128

Query: 123 VLSSVYKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAM 182
           VLS    + H ILDGNVKR LAR  A+EGWPG+K V+  LW   E  TPK D+ KYNQAM
Sbjct: 129 VLSLSLGQHHPILDGNVKRVLARHGAIEGWPGEKRVDTALWQLTEALTPKEDIQKYNQAM 188

Query: 183 MDMGAMICTRSKPKCSLCPVESFCLAKQQGNPQEYPGKKPKTDKPVKATWFVMLYHDNAV 242
           MDMGA ICTRS+PKC  CPV   C A+  G   E+PGKKPK   P +  W ++L   N V
Sbjct: 189 MDMGANICTRSRPKCGECPVAIDCKAQLAGRQGEFPGKKPKKTIPAREGWMLILQQANTV 248

Query: 243 WLEQRPQSGIWGGLYCFPQSEIAN-IQTTIDQRAIGDSTITSQKTLIAFRHTFSHYHLDI 301
            L +RP SGIWGGL+CFPQ +    +   ++   +    +T    L  FRHTFSH+HLDI
Sbjct: 249 KLIKRPPSGIWGGLWCFPQFDSKQALHAFVEANGLDAENLT---LLDGFRHTFSHFHLDI 305

Query: 302 TPILLQL--SRKPDIVMEGSKGLWYNLSHPDEIGLAAPVKQLLHTL 345
            P+ L+L  ++   ++ME +  LWYNL   + +GLAA  +++L +L
Sbjct: 306 QPVKLRLGSTQTEALIMEDNLSLWYNLLQGENLGLAAATERILASL 351