Pairwise Alignments

Query, 353 a.a., adenine DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., A/G-specific adenine glycosylase MutY (NCBI) from Rhodospirillum rubrum S1H

 Score =  231 bits (589), Expect = 2e-65
 Identities = 134/339 (39%), Positives = 192/339 (56%), Gaps = 18/339 (5%)

Query: 6   QAILTWYDAYGRKNLPWQ----QNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVH 61
           + +L WY    R  LPW+    +  + YRVWLSE+MLQQT V  VIPYF+ FL R+PTV 
Sbjct: 17  ERLLDWYRRNAR-TLPWRAPFGERTDPYRVWLSEVMLQQTTVPAVIPYFQAFLARWPTVT 75

Query: 62  ALAAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAA 121
            LAAAP DEVL  W GLGYYARARNLHK AQ + +   G FP   ++++ LPG+G  TAA
Sbjct: 76  DLAAAPLDEVLTAWAGLGYYARARNLHKCAQTIATWRDGTFPATEDELHTLPGIGTYTAA 135

Query: 122 AVLSSVYKKPHAILDGNVKRTLARCFA-VEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQ 180
           A+ +  + +P  ++DGN++R +AR FA  E  P  K     L+  A   TP     ++ Q
Sbjct: 136 AIAAIAFGQPAVVMDGNIERVMARLFAETEPLPQGKKA---LYARAAQLTPTAHPGEHAQ 192

Query: 181 AMMDMGAMICTRSKPKCSLCPVESFCLAKQQGNPQEYPGKKPKTDKPVK-ATWFVMLYHD 239
           A+MD+GA +CT  KP C LCP    CL ++ G  +  P K PK  KP +    F +   D
Sbjct: 193 ALMDLGATLCTPRKPACGLCPWRDPCLGRRLGLAETLPAKAPKKLKPTRCGIAFWVTRPD 252

Query: 240 NAVWLEQRPQSGIWGGLYCFPQSEIANIQTTIDQRAIGDSTITSQKTLIA--FRHTFSHY 297
             V L +RP+SG+ GG+   P +       T+ + A  ++ + ++   +A   RHTF+H+
Sbjct: 253 GTVLLRRRPESGLLGGMIEVPSTPWREDPWTLAE-ARAEAPLPAEWVPLAGRVRHTFTHF 311

Query: 298 HLDITPILLQLSRKPDIVMEGSKGLWYNLSHPDEIGLAA 336
           HLD+  +  ++  + +     ++GLW      D   L A
Sbjct: 312 HLDLDVVAGRVGARAN-----ARGLWVPFDQFDRHALPA 345