Pairwise Alignments

Query, 353 a.a., adenine DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., A/G-specific adenine glycosylase (RefSeq) from Shewanella loihica PV-4

 Score =  394 bits (1013), Expect = e-114
 Identities = 191/343 (55%), Positives = 245/343 (71%), Gaps = 4/343 (1%)

Query: 4   FAQAILTWYDAYGRKNLPWQQNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHAL 63
           F Q I+TWYD +GRK+LPWQQ+K  Y+VW+SEIMLQQTQVATVIPYFE F+ RFPT+  L
Sbjct: 22  FHQRIVTWYDKHGRKHLPWQQDKTPYKVWVSEIMLQQTQVATVIPYFEAFMARFPTILDL 81

Query: 64  AAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAV 123
           A A QDEVLH WTGLGYYARARNLHK+AQ++ S+Y G FPT  EQ+ ALPG+GRSTA AV
Sbjct: 82  ANADQDEVLHHWTGLGYYARARNLHKSAQLIASDYDGVFPTQFEQVLALPGIGRSTAGAV 141

Query: 124 LSSVYKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMM 183
           LS    + H ILDGNVKR LAR  A+ GWPG++ VE QLW      TPK  V +YNQAMM
Sbjct: 142 LSLSLGQHHPILDGNVKRVLARHGAIAGWPGKREVEQQLWQLTNSLTPKTGVTQYNQAMM 201

Query: 184 DMGAMICTRSKPKCSLCPVESFCLAKQQGNPQEYPGKKPKTDKPVKATWFVMLYHDNAVW 243
           D+GA ICTRSKP+C LCPV   C A+  G   E+PGKKPK   P K  + +++  D+ V 
Sbjct: 202 DIGASICTRSKPRCELCPVAIDCKAQLMGRQTEFPGKKPKKTIPEKLGYMLVIKDDDRVL 261

Query: 244 LEQRPQSGIWGGLYCFPQSEIANIQTTIDQRA-IGDSTITSQKTLIAFRHTFSHYHLDIT 302
           + +RP +GIWGGL+CFPQ +    Q  +++ A     T+ S++ + +FRHTFSH+HLDI+
Sbjct: 262 MSKRPPAGIWGGLWCFPQFD---SQEALEEFAKTNGLTLISEEPIDSFRHTFSHFHLDIS 318

Query: 303 PILLQLSRKPDIVMEGSKGLWYNLSHPDEIGLAAPVKQLLHTL 345
             +   +     +ME S  LWYN++ P ++GLAA  +++L +L
Sbjct: 319 AFVAHQTTSAHEIMEESGSLWYNIAKPPKVGLAAATERILASL 361