Pairwise Alignments

Query, 353 a.a., adenine DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., A/G-specific adenine glycosylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  419 bits (1078), Expect = e-122
 Identities = 205/349 (58%), Positives = 255/349 (73%), Gaps = 10/349 (2%)

Query: 4   FAQAILTWYDAYGRKNLPWQQNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHAL 63
           FA  I+ WYD +GRK LPWQQ+K  YRVW+SEIMLQQTQVATVIPY++RF++RFP V AL
Sbjct: 7   FATRIVNWYDNHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMQRFPNVLAL 66

Query: 64  AAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAV 123
           A AP DEVLH WTGLGYYARARNLHKAA+M+  EY G+FPTD EQ+ ALPG+GRSTA AV
Sbjct: 67  ANAPDDEVLHHWTGLGYYARARNLHKAAKMIRDEYQGQFPTDFEQVLALPGIGRSTAGAV 126

Query: 124 LSSVYKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMM 183
           LS    + H ILDGNVKR LAR  A+EGWPGQK VE +LW   E  TP+ D+ KYNQAMM
Sbjct: 127 LSLSLGQHHPILDGNVKRVLARHGAIEGWPGQKPVEERLWQLTEQLTPQQDIQKYNQAMM 186

Query: 184 DMGAMICTRSKPKCSLCPVESFCLAKQQGNPQEYPGKKPKTDKPVKATWFVMLYHDNAVW 243
           D+GA ICTRSKP C+ CPV   C A+  G   ++PGKKPK   P K+ W ++L+ DN V+
Sbjct: 187 DIGASICTRSKPNCAACPVAVDCKAQLMGRQTDFPGKKPKKTIPEKSAWMLVLFKDNQVF 246

Query: 244 LEQRPQSGIWGGLYCFPQ-SEIANIQTTIDQRAIGDSTITSQKTLIAFRHTFSHYHLDIT 302
           L +RP +GIWGGL+CFP+ S  A + T ++ +       T  + LI FRHTFSH+HLDI 
Sbjct: 247 LAKRPPAGIWGGLWCFPEFSSEAALNTELEAQGYQP---TQLEPLIGFRHTFSHFHLDIQ 303

Query: 303 PILLQL----SRKPDI--VMEGSKGLWYNLSHPDEIGLAAPVKQLLHTL 345
           P+LL L    S KP +  +ME ++ LWYN++ P ++GLAA  +++L  L
Sbjct: 304 PMLLDLDKWASGKPSVGAIMEQNQSLWYNINQPSKVGLAAATERVLANL 352