Pairwise Alignments

Query, 353 a.a., adenine DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., A/G-specific DNA-adenine glycosylase (RefSeq) from Shewanella sp. ANA-3

 Score =  407 bits (1045), Expect = e-118
 Identities = 202/356 (56%), Positives = 249/356 (69%), Gaps = 17/356 (4%)

Query: 4   FAQAILTWYDAYGRKNLPWQQNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHAL 63
           FA  I+ WYD +GRK LPWQQ+K  YRVW+SEIMLQQTQVATVIPY++RF+ RFP V AL
Sbjct: 7   FATRIVNWYDTHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMARFPDVLAL 66

Query: 64  AAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAV 123
           A AP DEVLH WTGLGYYARARNLHKAA+MV   Y G+FPTD EQ+ ALPG+GRSTA AV
Sbjct: 67  ANAPDDEVLHHWTGLGYYARARNLHKAAKMVRDLYQGQFPTDFEQVLALPGIGRSTAGAV 126

Query: 124 LSSVYKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMM 183
           LS    + H ILDGNVKR LAR  A+ GWPGQK VE QLW   E  TP+ D+ KYNQAMM
Sbjct: 127 LSLSLGQHHPILDGNVKRVLARHGAIAGWPGQKPVEEQLWQLTEQLTPEQDIQKYNQAMM 186

Query: 184 DMGAMICTRSKPKCSLCPVESFCLAKQQGNPQEYPGKKPKTDKPVKATWFVMLYHDNAVW 243
           D+GA ICTRSKP C+ CPV   C A+  G   E+PGKKPK   P KA W ++L  DN V+
Sbjct: 187 DIGASICTRSKPNCAACPVAIDCKAQLMGRQTEFPGKKPKKTIPEKAAWMLVLLKDNQVF 246

Query: 244 LEQRPQSGIWGGLYCFPQ-SEIANIQTTIDQRAIGDSTITSQKTLIAFRHTFSHYHLDIT 302
           L +RP +GIWGGL+CFP+ S  A +   ++ +    + +   + LI FRHTFSH+HLDI 
Sbjct: 247 LAKRPPAGIWGGLWCFPEFSTQAALNAELEAQGYHAAQL---EPLIGFRHTFSHFHLDIQ 303

Query: 303 PILLQLSRKPD-------------IVMEGSKGLWYNLSHPDEIGLAAPVKQLLHTL 345
           P+LL L  + +              VME ++ LWYN++ P ++GLA+  +++L  L
Sbjct: 304 PMLLNLDSQANGYDKQTLGMQSVGAVMEQNQSLWYNINQPSKVGLASATERVLANL 359