Pairwise Alignments

Query, 375 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., lytic transglycosylase, catalytic (RefSeq) from Shewanella loihica PV-4

 Score = 52.0 bits (123), Expect = 5e-11
 Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 21/163 (12%)

Query: 212 RKASRKYDIPEDLIYAIIKTESSFNPYAVSWANAYGLMQVVPKTAGRDVFKLVKNRSGEP 271
           + AS+   +  D I AI + ES+F PYA S   A GLMQ++P TA     K     SG  
Sbjct: 486 KAASKSAKVDIDEIRAIARRESAFYPYATSGVGARGLMQLMPATAKETARKHGMKYSGSK 545

Query: 272 SPEYLFNPENNIDTGTAYFYILKNRYLKEVRHPTSLEYSMISAYNGGTGGVLSTFSSDRQ 331
           S   L++   N   G+ Y+                   S++  ++G      + +++   
Sbjct: 546 S---LYDVSLNTALGSRYY------------------KSLLDKFDGNRVLATAAYNAGPH 584

Query: 332 RAMRDLNALQPNQVYWALTKKHPNAEARRYLEKVTKFKKEFNA 374
           R  R L   Q     +A  +  P  E R Y++ V  ++  + A
Sbjct: 585 RVTRWLEQSQGKLDVYAFIESIPFTETREYVQAVLSYRAIYQA 627