Pairwise Alignments

Query, 375 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., Lytic transglycosylase catalytic (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  159 bits (402), Expect = 1e-43
 Identities = 97/291 (33%), Positives = 154/291 (52%), Gaps = 14/291 (4%)

Query: 94  VNFTEGRIIVETVS---PIDPKAHLRNAIITTLLTPDDPAHVDLFSSKDIELKGQPFLYQ 150
           V+F  G + V TV    P+D  A     I+  L    DP  VD   + D  L  +P  Y 
Sbjct: 141 VSFAGGGVAVPTVDGHRPVDAMADASPMILLGL----DPLRVDGGRAGDPTLVAEPAFYG 196

Query: 151 QVLDQDGQPIQWS-WRANRYADYLIANHLKVKQVDFKKAYY------VEIPMVKDQIDIR 203
           + LDQ G+P++W+    +R      A   +      ++  Y      V +    +Q+ +R
Sbjct: 197 EALDQAGRPLRWTRGETSRLLARECAATRRSVVAGVRRPVYGGASREVLVTATPEQMLLR 256

Query: 204 GYKYASIVRKASRKYDIPEDLIYAIIKTESSFNPYAVSWANAYGLMQVVPKTAGRDVFKL 263
             +Y   V + +R+Y++   L+ AI+  ES FNP AVS A A GLMQ+VP+TAG +V   
Sbjct: 257 ARQYRDTVDRYARRYNLSPRLVLAIMHAESGFNPNAVSPAQALGLMQIVPETAGGEVHAY 316

Query: 264 VKNRSGEPSPEYLFNPENNIDTGTAYFYILKNRYLKEVRHPTSLEYSMISAYNGGTGGVL 323
           +    G+P  + LF+P  NI  GT Y ++L NR+  ++ +P + E  +I+AYNGG   +L
Sbjct: 317 LHGTPGQPPRDALFDPGTNIRYGTVYLHLLANRHFSDITNPATRELCVIAAYNGGPNALL 376

Query: 324 STFSSDRQRAMRDLNALQPNQVYWALTKKHPNAEARRYLEKVTKFKKEFNA 374
             F +DR +A+  +NA+   QVY  L +  P  E+R+Y++KV    + F++
Sbjct: 377 RVFDADRDKAVAAINAMTTQQVYDKLVRHMPADESRKYVDKVLASLENFSS 427