Pairwise Alignments

Query, 375 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., transglycosylase SLT domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 19/112 (16%)

Query: 207 YASIVRKASRKYDIPEDLIYAIIKTESSFNPYAVSWANAYGLMQVVPKTAGRDVFKLVKN 266
           Y S++ +A+ K+ +   LI A+I  ES+FN  AVS A A GLMQ++P+TA          
Sbjct: 112 YDSLISRAADKHQLDPALIRAVIHAESAFNARAVSRAGAMGLMQLMPETA---------- 161

Query: 267 RSGEPSPEYLFNPENNIDTGTAYFYILKNRYLKEVRHPTSLEYSMISAYNGG 318
              +      F PE NI  G+ Y      + LK+     +L     +AYN G
Sbjct: 162 --KDMGVTNAFLPEENILGGSKYL----AQMLKQFNGDIAL---ACAAYNAG 204