Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  218 bits (555), Expect = 5e-61
 Identities = 155/533 (29%), Positives = 258/533 (48%), Gaps = 11/533 (2%)

Query: 13  IILAALLALTATGLWTLRVASNL-DNKARVTE-LFNSAYSILTEVEKLAQEGKMSEPEAK 70
           ++++ ++  T   L   ++ S+L   K + T+ +  +A  +LT  + L   G ++   A+
Sbjct: 17  LVVSIVMLFTLGALMLKQIHSDLYQAKVQKTQHVVQTASGVLTYYQGLEAAGTLTRDAAQ 76

Query: 71  ALATRLMRNNLYKDNEYVYVADENMTFVATPLDPQLHDTSFHDFKDGKGNSVGRLIQDVL 130
             A   +R   Y   +Y ++ D     +  P +P+L   +    +D  G ++   +  + 
Sbjct: 77  KQALSAVRGLRYNQTDYFWINDLTPVMIMHPTNPKLEGQNLSAIRDPNGYALFNEMVAIA 136

Query: 131 RHQSGKLVEYTWTQKQADGSIEEKLSIARKTPHWGWVVGTGIGFNEVNARFWSTAQWQLS 190
           + +   ++ Y W +  A+  +  K S  +    WGW++G+G+  ++V A F S    Q+ 
Sbjct: 137 KSKGAGMINYLWPKPGAEAPVG-KTSYVQLFEPWGWIIGSGVYVDDVQAEFQS----QVI 191

Query: 191 LCVVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGR--IRREFVIKAPKESIYG 248
              V+ + I  L+ + +  I+  I G   E  +A+  +A G   + R        E    
Sbjct: 192 KASVVGLVITLLMGLLLTLIVRSIVGPLQETVNAMANIASGESDLTRTLDTHGQDEVTQL 251

Query: 249 A--VQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMTEM 306
           A      ++ L  +V +L+ S  AL    +  G  A    E +  Q Q   ++ATA+ E+
Sbjct: 252 ARHFNAFTAKLRQVVTQLQASASALGQSSSELGNDAAQAQERSQQQSQQMELVATAINEV 311

Query: 307 ASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDV 366
                 VA +A   A     A+ Q+Q  Q  I  ++  I  L+  +  A   +  L  + 
Sbjct: 312 TYGVQDVAKNAEHAANEMRDAESQAQQGQVNIDGSLQQIDRLSQTIDQAVEVIRTLASES 371

Query: 367 KNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQ 426
             I  VL+VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RTQ ST EIQ
Sbjct: 372 TQIGSVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQ 431

Query: 427 QMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAA 486
            MI  LQ  S  A++ I    + SQ +++++  A ++L  I  AL +++S++  IA+A  
Sbjct: 432 AMIERLQTHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNLNSLNASIASATL 491

Query: 487 EQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
           +Q  V +DI + +          +    +S  ++  L  L+ +L      F V
Sbjct: 492 QQAHVVEDINQNVTQAAGLSHSTAMAAEQSSQASTRLKALSEQLNGLLTQFRV 544