Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  189 bits (480), Expect = 2e-52
 Identities = 123/344 (35%), Positives = 188/344 (54%), Gaps = 5/344 (1%)

Query: 197 VAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQ---GRIRREFVIKAPKE--SIYGAVQ 251
           + ++S +L+ +  + L+       +R+ +  V +   GR           E  ++  A  
Sbjct: 194 IMLVSGVLIGLFSLWLVNRNLVQPIRNLIDYVTRLSHGRFAERVTSNRQDELGNLAVAAN 253

Query: 252 QMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMTEMASSAN 311
            +   LA+   +L++S   L S        A  +++ T  Q + T  +ATAM EM+++A 
Sbjct: 254 TLRDFLAETFTRLQRSATELDSASGELNAIASLMSQGTSEQFERTDQVATAMNEMSATAQ 313

Query: 312 QVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKNIAK 371
           +VA  A D A   D ADQ +Q  +K++  T+  I  +  ++   +T +  L+ D   I K
Sbjct: 314 EVARHAADAARAADDADQSAQQGEKVMQGTIHTITRMRGEIANTATVIRQLETDSGRIGK 373

Query: 372 VLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQMIHN 431
           VL+VI  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RT +S  EI Q+I  
Sbjct: 374 VLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTASSIIEINQIIQT 433

Query: 432 LQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAEQTQV 491
           +Q G+ +A   I+     S+ SV++   A   L  I  A+E++  M+ QIATAA EQT V
Sbjct: 434 VQTGAVDAAHAIESGQSRSEESVEQVTQAGVMLERITQAVEAIRDMNRQIATAAEEQTSV 493

Query: 492 SDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAA 535
           ++DI+R +  I    S     V  +  +++ L  L+ +L +  A
Sbjct: 494 AEDISRNLTEITCIASTNLDNVQRTEAASRDLHGLSGQLNEVTA 537