Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  211 bits (536), Expect = 8e-59
 Identities = 163/569 (28%), Positives = 274/569 (48%), Gaps = 40/569 (7%)

Query: 1   MKLKTQAYLLSAIILAALLALTATGLWTL------------RVASNLDNKARVTELFNSA 48
           M+L  +A +LS  IL  LL+     L T             +    L ++A+ T L N  
Sbjct: 1   MRLSLKAKVLSLAILPVLLSAVIISLTTAFILKEQASKEVQQTRERLLSEAKAT-LQNYV 59

Query: 49  YSILTEVEKLAQEGKMSEPEAKALATRLMRNNLYKDNEYVYVADENMTFVATPLDPQLHD 108
              LT ++ L       + EA+A A +L+ N  Y  + Y +  D     +     P    
Sbjct: 60  AVGLTAIKPLYDAATPGDNEARAQAIKLLSNISYGKDGYFFGYDSETIRLFKANSPDGVG 119

Query: 109 TSFHDFKDGKGNSVGRLIQDVLRHQSGKLVEYTWTQKQADGSIEEKLSIARKTPHWGWVV 168
            SF D +D  G  V R +  V +  +  L EY+ +       +  KL        W   V
Sbjct: 120 KSFKDNRDPNGVYVNRDLVKVAKDGTHYL-EYS-SPLPGSQDLVPKLGYTEYLSKWDLAV 177

Query: 169 GTGIGFNEVNARFWSTA-----QWQLSLCVVIAVAILSLLLVAIRKILLIIGGEPNEVRS 223
           G+ +  + + A+          + Q  +  ++ +A + LL++A+  +LL      N +  
Sbjct: 178 GSSVNLDGIEAQVALVEAKVHDRVQGVILSIVGIAAVVLLVIAVVGLLLA-----NAILR 232

Query: 224 AVQ---------AVAQGRIRREFVIKAPKESIYGAVQQMSSSLADLVAKLEQSMVALRSE 274
            +          A  +G + R   I +  E   G +    +   D +  L + +  + S+
Sbjct: 233 PLHLMKDNLDDIAAGEGDLTRRLTITSQDE--LGQLAGSFNRFVDKIHGLVRQITDMTSQ 290

Query: 275 LAGAGTRAKSIAELTDS----QQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQ 330
           L G  T+    A+ ++     Q+  T  +ATA+ EM+S+A +VA SA+  A    Q D++
Sbjct: 291 LTGLVTQVSEQAQRSEQAMERQRHETDQVATAINEMSSAAQEVARSAQGAAVAAQQTDEE 350

Query: 331 SQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNA 390
            Q  ++++  ++  I  L   ++++  ++  L  DV +I  VL VI  IAEQTNLLALNA
Sbjct: 351 GQSAKRVVAGSIQQIHALVNDIRSSGVSLDSLQQDVASIVSVLGVIRSIAEQTNLLALNA 410

Query: 391 AIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTS 450
           AIEAARAGE GRGFAVVADEVR LA RTQ ST+EIQ MI  LQ G+  A++ ++   +  
Sbjct: 411 AIEAARAGEAGRGFAVVADEVRALASRTQQSTQEIQGMIDRLQSGTHAAVEAMRRSSEAG 470

Query: 451 QSSVQESENAASALALIVSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLS 510
             + + +  A ++L  +   + +++SM+ QIA+AA EQT V+++I R ++ I  +   ++
Sbjct: 471 DGTSERANEAGASLDTMAQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVA 530

Query: 511 RVVMESHNSTQTLTKLARELEQWAAHFEV 539
                   ++++L  L + L +    F +
Sbjct: 531 DETQLGAQTSRSLADLGQRLGKLVGQFRI 559