Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  185 bits (470), Expect = 3e-51
 Identities = 114/349 (32%), Positives = 200/349 (57%), Gaps = 5/349 (1%)

Query: 193 VVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGR--IRREFVIKAPKE--SIYG 248
           V++ V +L  +LV +  + L++      +   V+ +A+G   ++    +++  E   +  
Sbjct: 195 VILLVGLLGCILVLV-VLPLVVLSPMRRLLHRVEQIAEGGGDLKGRLEVRSADELGQLGS 253

Query: 249 AVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMTEMAS 308
           A  +    L  L+A++ +    + S        A +   L  S+  +   ++TA T+M++
Sbjct: 254 AFNRFLDKLQPLIAEVGRVTGEVDSAARAMADMAATNDRLISSEHAALDQVSTAATQMSA 313

Query: 309 SANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKN 368
           + ++VA +A + +    QA  QS+   +++ +T+ +I+ LA ++++AS  +  L  +  +
Sbjct: 314 AVHEVAHNAANASGAAQQASSQSRDGAEVVSSTIESIRQLAQEVESASGTIEALAQETSS 373

Query: 369 IAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQM 428
           I  VL+VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RTQ STK+IQ  
Sbjct: 374 IGAVLEVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTKDIQVR 433

Query: 429 IHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAEQ 488
           I  LQ G   A+Q + +    ++ SV+ +      L+    +++ ++ M+ QIA+A  EQ
Sbjct: 434 IERLQSGVAKAVQAMHVGSTKARDSVERAAGVDQVLSGTGGSIQQINDMAAQIASACEEQ 493

Query: 489 TQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHF 537
           + V+++IAR I+ I +  ++ +    +S +++Q L+ L+R L +    F
Sbjct: 494 SSVTEEIARNISDIRDLSNEAAANSAQSMHASQQLSSLSRNLAELTGRF 542