Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N1B4

 Score =  189 bits (479), Expect = 4e-52
 Identities = 148/459 (32%), Positives = 232/459 (50%), Gaps = 24/459 (5%)

Query: 94  NMTFVATPLDPQLHDTSFHDFKDGKGNSVGRLIQDVLRHQSGKLVEYTWTQKQADGSIEE 153
           N   VA   DP        D  D K          +    + K  E T+T  +A G IE 
Sbjct: 266 NGRIVAYTKDPSKFGEKVSDILDSK---------QIANMANLKRGEVTYTVDKAQGRIEL 316

Query: 154 KLSIARKTPHWGWVVGTGIGFNEVNARFWSTAQWQLSL---CVVIAVAILSLLLVAIRKI 210
            L          W +   +  N V A      Q  L          +A++ LL+ +I  +
Sbjct: 317 YLPFGIGQTDARWTLMLQLPLNAVMADL-QKLQGDLDAQRKSDTFGMAMVGLLIASIGLL 375

Query: 211 LLIIGGEP-----NEVRSAVQAVAQGRIRREFVIKAPKESIYGAVQQ-MSSSLADLVAKL 264
           ++ + G        ++ + +  +AQG       + + +    G++ +  ++ LA L A +
Sbjct: 376 VIWLVGHGIARPLKQMVAMLDDIAQGEGDLTRRLTSDRADELGSIAKGFNTFLAKLQAMI 435

Query: 265 EQSMVALRSELAGAGTRAKSIAELTD----SQQQSTAMIATAMTEMASSANQVADSARDT 320
            Q + +++S ++ +      IA  T+     Q      +ATA+ EM ++A  VA +A   
Sbjct: 436 TQVVTSVQS-VSDSSEHTADIAIRTNIGVHKQMAEIDQVATAVHEMTATAQDVARNATQA 494

Query: 321 AFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKNIAKVLDVIGDIA 380
           A     ADQ +    +++ +T ++I  LA ++  A   V  L  D +NI  +L  I  IA
Sbjct: 495 AQAASHADQAAAQGMQIVRDTSNSIGVLAVEIGKAVGVVQTLAKDSENINAILTAIRGIA 554

Query: 381 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAI 440
           EQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLA +TQ +T+EIQ MI +LQ+G+R+ +
Sbjct: 555 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQHLQQGTRDVV 614

Query: 441 QTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAEQTQVSDDIARRIN 500
           + ++     +  SVQ +  AA AL  I  A+  ++ M+ QIA+AA EQ+ V+DDI R + 
Sbjct: 615 RVMEDSQNRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAVADDINRNVI 674

Query: 501 MIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
            I +  ++++    ES  ++  LTKLA +  +    F+V
Sbjct: 675 NIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 713