Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 586 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N1B4

 Score =  218 bits (555), Expect = 5e-61
 Identities = 159/563 (28%), Positives = 283/563 (50%), Gaps = 27/563 (4%)

Query: 1   MKLKTQAYLLSAIILAALL---ALTATGLWTLRVASNLDNKARVTELFNSAYSIL----- 52
           M++  +A +LS  +L  LL    ++ T L+ L+  +  + +     L + A + L     
Sbjct: 27  MRMSLKAKVLSLAVLPVLLFALVISLTTLFILQEQARKEVEQTRQRLLSDAKATLQSYVA 86

Query: 53  ---TEVEKLAQEGKMSEPEAKALATRLMRNNLYKDNEYVYVADENMTFVATPLDPQLHDT 109
              T ++ L       +  A+A   +L+ +  Y  + Y +  D N   +     P+    
Sbjct: 87  VAMTTIKPLYDAAAPGDDAARAQVVKLLSSITYGKDGYFFGYDSNTVRLFKANSPEGVGQ 146

Query: 110 SFHDFKDGKGNSVGRLIQDVLRHQSGKLVEYTWTQKQADGSIEEKLSIARKTPHWGWVVG 169
           SF D +D  G  V R +  V +  +  L +Y+ T       +  KL      P W   VG
Sbjct: 147 SFKDNRDPNGVYVNRDLVKVAKDGTHYL-QYSSTLPGNTQVLVPKLGYTEYLPKWDMAVG 205

Query: 170 TGIGFNEVNARFWSTA-----QWQLSLCVVIAVAILSLLLVAIRKILLI--IGGEPNEVR 222
           T +  + + A+          + Q  +  ++ +A++ LL++A   +LL   I    N ++
Sbjct: 206 TSVNLDGIEAQVAVVEAKVQERMQGVVLSIVGIAVVVLLMIAAAGMLLANTILRPLNLMK 265

Query: 223 SAVQAVA--QGRIRREFVIKAPKESIYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGT 280
           + +  +A  +G + R   I +  E   G +    +   D +  L + +  + S+L G   
Sbjct: 266 ANLDDIAAGEGDLTRRLTITSQDE--LGELAGSFNRFVDKIHGLVRQITEMTSQLTGLVN 323

Query: 281 RAKSIAELTDS----QQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQK 336
           +    A+ +D     Q+  T  +ATA+ EM+++A +VA SA++ A    Q D++ Q  ++
Sbjct: 324 QVSDQAQRSDQAMERQRHETDQVATAINEMSAAAQEVAKSAQNAAVAAQQTDEEGQAAKR 383

Query: 337 LIHNTVSNIQGLATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAAR 396
           ++  ++  I  L   ++++  ++  L  DV +I  VL VI  IAEQTNLLALNAAIEAAR
Sbjct: 384 VVAGSIVKIHALVNDIRSSGVSLDSLQKDVSSIVSVLGVIRSIAEQTNLLALNAAIEAAR 443

Query: 397 AGEQGRGFAVVADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQE 456
           AGE GRGFAVVADEVR LA RTQ ST+EIQ MI  LQ G+++A++ ++   +    +  +
Sbjct: 444 AGEAGRGFAVVADEVRALASRTQISTQEIQGMIDRLQAGTQSAVEAMRRSSEAGDGTSAQ 503

Query: 457 SENAASALALIVSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMES 516
           +  A ++L  +   + +++SM+ QIA+AA EQT V+++I R ++ I  +   ++      
Sbjct: 504 ANEAGASLDAMAQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLG 563

Query: 517 HNSTQTLTKLARELEQWAAHFEV 539
             ++++L  L + L +    F +
Sbjct: 564 AQTSRSLADLGQRLGKLVGQFRI 586