Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  210 bits (534), Expect = 1e-58
 Identities = 131/358 (36%), Positives = 212/358 (59%), Gaps = 5/358 (1%)

Query: 184 TAQWQLSLCVVIA-VAIL---SLLLVAIRKILLIIGGEPNEVRSAVQAVAQGRIRREFVI 239
           TA   L+L V +  VA+L   ++ +V IRK+   +G EP+EV   +  +A G + +  V 
Sbjct: 187 TASGFLALIVAVTGVAVLLGVAIAVVIIRKLRSTLGAEPDEVARVIGNLANGDLGQRIVT 246

Query: 240 KAPKESIYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMI 299
             P +S+ GA  +M+S L  ++A++  +   + +  +   T + S  +    Q      +
Sbjct: 247 PYP-DSVMGATAKMASRLTSIIAEVRTAADGVGTASSELLTSSASSNQQIQRQSAEAEQV 305

Query: 300 ATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAV 359
           ATA+ +MA++ ++VA  A + A     AD+Q +   +++  T  +I  LA  L++A+  V
Sbjct: 306 ATAINQMAATVSEVASFAANAATAAKSADEQVETGTRIVGETAVSIHNLAKVLESATDTV 365

Query: 360 ADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQ 419
             +     +I K+L VI  IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA RTQ
Sbjct: 366 NQVSAQSGDIEKILQVITAIAEQTNLLALNAAIEAARAGDHGRGFAVVADEVRSLANRTQ 425

Query: 420 TSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSH 479
            S+ EI +MI +LQ G+  A++ +Q   Q +Q +V+++  A +ALA I   + +++ M+ 
Sbjct: 426 QSSSEISEMIASLQAGAGRAVEVMQSSKQLAQQTVEQTLQAENALAKIRQEVGAINEMNA 485

Query: 480 QIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHF 537
           QIATA+ EQ+ V++++ + +  I +S    S    +   S+Q LT LA+EL +   +F
Sbjct: 486 QIATASEEQSAVAEEVNQSVTRIHDSTVTSSAASNQVAASSQDLTTLAQELNRRVNYF 543