Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  178 bits (451), Expect = 5e-49
 Identities = 117/352 (33%), Positives = 193/352 (54%), Gaps = 9/352 (2%)

Query: 197 VAILSLLLVAIRKILLIIGG------EPNEVRSAVQAVAQGRIRREFVIKAPKES---IY 247
           VA+ S L + +  IL  I G      + +E+R  ++ V+QG       ++   +    I 
Sbjct: 178 VALGSTLCILLLVILGRIAGMNWLMLQIDELRGRLEKVSQGDFSAPLQVRHADDEMGMIT 237

Query: 248 GAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMTEMA 307
            A  ++   + +++  + Q+     ++       A   A   + QQ     +ATAM EM 
Sbjct: 238 LAYNRLLGQVGEMIKGVRQAADDADAQCVRMAGLAGDSARNVEGQQAEIDQVATAMNEML 297

Query: 308 SSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVK 367
           +++++VA S  + A   D A+Q++     +++ +V  I+ L+  +   S  +  L  D  
Sbjct: 298 ATSHEVARSTVEAANAADVAEQETNAGSTVMNESVGAIRTLSGHVDGLSDVMQQLVQDSH 357

Query: 368 NIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQ 427
            I KVL+VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RTQ+S KE+  
Sbjct: 358 EIGKVLNVISGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQSSAKEVGV 417

Query: 428 MIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAE 487
           ++  LQ  +  A   +    Q+S +++ + E A  AL  IV A++++  M++QIATAA E
Sbjct: 418 LVERLQSQATRAGHAMDASRQSSATTLTQIEAAQHALGQIVGAVQTIRGMTNQIATAAEE 477

Query: 488 QTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
           Q+QV++D+ + +  I +   + + V  ++  S  T+ +  + L+     F +
Sbjct: 478 QSQVAEDMNQSLTRIAQVADQAAGVTQDTAASGNTIMQSMKGLKSLTGRFRL 529