Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  186 bits (471), Expect = 3e-51
 Identities = 125/374 (33%), Positives = 201/374 (53%), Gaps = 5/374 (1%)

Query: 171 GIGFNEVNARFWSTAQWQLSLCVVIAVAILSLLLVAIRKILLIIGGEPNEVRSAV---QA 227
           G+  N  NA      +   S    + VA++   +  I   +L+       +  AV   + 
Sbjct: 166 GLNRNAANAASAHALEVAASAFQGVVVAMILAFIATIILAMLLTRSIVQPLAEAVGVAEV 225

Query: 228 VAQGRIRREFVIKAPKES--IYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSI 285
           +A G + R F +    E   +  A+Q M  SL + +  +  S   L S         +  
Sbjct: 226 IAGGDLTRHFQVVGSDEPARLLSALQAMQRSLRETIQGISDSSNQLASAAEELNVVTEDS 285

Query: 286 AELTDSQQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNI 345
                 Q       ATA+ EM ++ ++VA +A  T+  + ++D+ +QH ++ +  TV +I
Sbjct: 286 TRGLHQQNHEIEQAATAVNEMTAAVDEVARNAVATSEASRESDETAQHGRQQVIRTVDSI 345

Query: 346 QGLATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFA 405
             LA  +   +T V  L   V++I+KVLDVI  IAEQTNLLALNAAIEAARAG+ GRGFA
Sbjct: 346 GLLADDVTQTATEVERLAGQVRDISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFA 405

Query: 406 VVADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALA 465
           VVADEVR LA RTQ ST+EI+QMI ++ +G+  A+  +Q+  + ++++++ +  A  AL 
Sbjct: 406 VVADEVRALAHRTQQSTQEIEQMIGDVHQGTDKAVHAMQLSNERARTTLELARAAGEALD 465

Query: 466 LIVSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTK 525
            I SA+  +S  +  IA+A+ EQ QV+ ++ R +  I +   + S    ++  ++Q L +
Sbjct: 466 GIASAISQISERNLVIASASEEQAQVAREVDRNLVNIRDLSLQSSAGANQTSAASQELAR 525

Query: 526 LARELEQWAAHFEV 539
           LA +L    A F+V
Sbjct: 526 LAIDLNNLVARFQV 539