Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  174 bits (440), Expect = 9e-48
 Identities = 117/348 (33%), Positives = 191/348 (54%), Gaps = 18/348 (5%)

Query: 196 AVAILSLLLVAIRKILL-IIGGEPNEVRSAVQAVAQ-GRIRREFVIKAPKE--------- 244
           AVA+L L L+A  ++L+  +    N ++  +  V + G ++    + +  E         
Sbjct: 142 AVAVLMLGLLAASQLLIRFLLSHLNTLKDVMLHVERSGDLQARVPLDSRDEVGQMASAFN 201

Query: 245 SIYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMT 304
           ++ G  Q++ S++A   A+L++    L        T    + +    QQ  T   ATA+ 
Sbjct: 202 AMQGGYQRVVSTVAQAAARLDEGASRL-------ATSMNDVHKGMRGQQGETDQAATAIN 254

Query: 305 EMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDL 364
           EM+++ +Q+A+ AR+T   +  AD+ +    +++     +I  L+  +Q     +  L  
Sbjct: 255 EMSATVHQIAEHARETRDQSQNADRLAGDGHRVVGRVEKSISSLSQGVQQTGEMIEQLAA 314

Query: 365 DVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKE 424
           D + I  V++VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLA R Q ST E
Sbjct: 315 DSQRINGVVNVIHSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKRVQDSTDE 374

Query: 425 IQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATA 484
           I QMI  LQ  +R+A++ +Q     +   V+E+ +AA AL  I  A+  +   + QIA A
Sbjct: 375 ITQMISGLQSMTRDAVEFMQESSLKADDCVREAHDAAQALEAIADAVAQMRESNTQIAVA 434

Query: 485 AAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQ 532
           A +Q+QV++++ R +  I +   +     + S +++  L  L+ +L +
Sbjct: 435 AEQQSQVAEELNRSVTGIRDVTERTVEQTVSSASTSAELAALSADLSR 482