Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  197 bits (502), Expect = 6e-55
 Identities = 136/372 (36%), Positives = 205/372 (55%), Gaps = 20/372 (5%)

Query: 176 EVNARFWSTAQWQLSLCVV-IAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGRIR 234
           EV+     +   QL L V+ + V  +++  V IR+I        N +R  + A+A+    
Sbjct: 180 EVDRNIMISGAIQLLLLVIGVVVMCMTVRHVIIRRI--------NAMRHTMNAMAEDEDL 231

Query: 235 REFVIKAPKESIYGAVQQMSSSLADLVAKLEQSMVALRS---ELAGAGTRAKSIAELT-- 289
              V    K+ I GA   M  +   ++ K   S+ A+     +L     R   +AE T  
Sbjct: 232 SRSVAIGAKDEI-GA---MGDAFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLA 287

Query: 290 --DSQQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQG 347
             + Q+  T M+A+AM EM+++  +VA +A  TA  +  AD +S+   K+    +  I+ 
Sbjct: 288 AVNEQRSETDMVASAMNEMSATVQEVARNANQTATASAGADTESKAGVKVATEALDGIEV 347

Query: 348 LATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVV 407
           L  +++ A+  +  ++ D  +I  VL VI  IAEQTNLLALNAAIEAARAGEQGRGFAVV
Sbjct: 348 LIAEIEKAAQVIQRVESDSASIDMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVV 407

Query: 408 ADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALI 467
           ADEVR LA RTQ ST+EIQ MI  LQ G RNA+Q ++     ++S  Q  E AA +L LI
Sbjct: 408 ADEVRTLASRTQKSTEEIQAMIEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLI 467

Query: 468 VSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLA 527
            + + +++ M+ QIATAA +Q+ V+++I R I+ I       S    ++   +  L +LA
Sbjct: 468 ATEVGTINEMNTQIATAAEQQSAVAEEINRNISTISRIADTTSTDATQTSEISDELVRLA 527

Query: 528 RELEQWAAHFEV 539
            EL +    F++
Sbjct: 528 TELNRLVGQFKL 539