Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  202 bits (515), Expect = 2e-56
 Identities = 159/553 (28%), Positives = 271/553 (49%), Gaps = 34/553 (6%)

Query: 7   AYLLSAIILAALLALTATGLWTLRVASNLDNKARVTELFNSAYSILTEVEKLAQEGKMSE 66
           A LLS I +  L +L        R +   D +A +      A + +  + + + EG M  
Sbjct: 46  AILLSGIAVYELQSLAEQQEAHTRDSLIQDRRAELKHYVELARNAIGPIYERSAEGDM-- 103

Query: 67  PEAKALATRLMRNNLYKDNEYVYVADENMTFVATPLDPQLHDTSFHDFKDGKGNSVGRLI 126
            +A+  A  ++    Y  + Y +  D     +           SF+D++D  G      I
Sbjct: 104 -QARDQAVAILERLSYGKDGYFWGYDTQAVRILQGNTKDKIGQSFYDYRDPNGVYA---I 159

Query: 127 QDVLR--HQSGKLVEYTWTQKQADGSIEEKLSIARKTPHWGWVVGTGIGFNEVN------ 178
           ++++R      + V+Y++    +   +  K+  A   P W  V GT +  + V       
Sbjct: 160 RELVRAGQDGSRYVDYSFVLGNSS-ELVPKVGYAEFLPKWKMVFGTSLNLDGVERDVQAA 218

Query: 179 -ARFWSTAQWQLSLCVVIAVAILSLLLV-------AIRKILLIIGGEPNEVRSAVQAVAQ 230
            A F       +++ +V A A+L L+ +       A+   LL+I    +++     A   
Sbjct: 219 RAEFQKRIDGLVTIMLVSAFALLVLMALLAIFMSNALLSPLLLIKRNLDDM-----AQGD 273

Query: 231 GRIRREFVIKAPKESIYGAVQQMSSSLADLVAKLEQSMVALRSELAG----AGTRAKSIA 286
           G + +   I +  E   G +    +   + +  L Q +    ++L+G      ++A+   
Sbjct: 274 GDLTQRLPITSQDE--LGELAMSFNRFVEKIHSLVQQVAGTTTQLSGLVGAVASQAQRSE 331

Query: 287 ELTDSQQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQ 346
           +    Q+  T  +ATA+ EM+++A++VA SA+  A    + DQQ    ++++  ++  I 
Sbjct: 332 QAMADQRSETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIH 391

Query: 347 GLATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAV 406
            L  +L+ +  ++  L  DVK I  VLDVI  IAEQTNLLALNAAIEAARAGE GRGFAV
Sbjct: 392 ELVGELRGSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAV 451

Query: 407 VADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALAL 466
           VADEVR LA RTQ ST EIQ MI  LQ  + N + T+   G+  +S+  ++  A  +L  
Sbjct: 452 VADEVRALASRTQQSTGEIQGMIDRLQSATSNTVSTMLRAGEKGESTRDQANQAGESLDA 511

Query: 467 IVSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKL 526
           I + + +++SM+ QIA AA EQT V+++I R ++ I ++   ++    +   +++ L  L
Sbjct: 512 ISALIGTINSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTSRELNGL 571

Query: 527 ARELEQWAAHFEV 539
           A  L++    F +
Sbjct: 572 AERLQKLVGQFRI 584