Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  199 bits (505), Expect = 3e-55
 Identities = 154/546 (28%), Positives = 268/546 (49%), Gaps = 20/546 (3%)

Query: 7   AYLLSAIILAALLALTATGLWTLRVASNLDNKARVTELFNSAYSILTEVEKLAQEGKMSE 66
           A +LS + +  L  L        R +   D +A +      A + +  + + + EG M  
Sbjct: 23  AVVLSGVSVVQLKDLADQQEAQTRASLIRDRRAELKHYVELAKNAIGPIYERSAEGDM-- 80

Query: 67  PEAKALATRLMRNNLYKDNEYVYVADENMTFVATPLDPQLHDTSFHDFKDGKGNSVGRLI 126
            +A++ A  +     Y    Y +  D     V      +    SF D++D  G      I
Sbjct: 81  -QARSQAVAIFERLSYGSEGYFWGYDGQSRRVFQGATRERIGESFADYRDPNGVFA---I 136

Query: 127 QDVLR--HQSGKLVEYTWTQKQADGSIEEKLSIARKTPHWGWVVGTGIGFNEVN-----A 179
           +++++    S   V+Y++    ++  +  K+  A   P W  V GT +  ++V      A
Sbjct: 137 RELVKAGQDSSHYVDYSFAVPGSNALVP-KVGYAEYLPKWNLVFGTSLNLDDVERDVVEA 195

Query: 180 RFWSTAQWQLSLCVVIAVAILSLLLVAIRKILL--IIGGEPNEVRSAVQAVAQGRIRREF 237
           R    A+      +++  A+L L+L+A   +L+   I     +++  +  +AQG      
Sbjct: 196 RAVFQARIDSLTLIMLGSALLLLILMAGLAVLMSNAILRPLLQIKQNLDDMAQGDGDLTH 255

Query: 238 VIKAPKESIYGAVQQMSSSLADLVAKLEQSMVALRSELAG----AGTRAKSIAELTDSQQ 293
            +        G +    +   + +  L + +    ++L+G      ++A+   +    Q+
Sbjct: 256 RLPITSRDELGELSTSFNRFVEKIHALVRQVAGTTTQLSGLVGAVASQAQRSEQAMADQR 315

Query: 294 QSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQ 353
             T  +ATA+ EM+++A++VA SA+  A    + DQQ    ++++  ++  I  L  +L+
Sbjct: 316 SETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELR 375

Query: 354 TASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRN 413
            +  ++  L  DVK I  VLDVI  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR 
Sbjct: 376 GSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRA 435

Query: 414 LAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALES 473
           LA RTQ ST EIQ MI  LQ  + + + T+   G+  +S+   +  A  +L  I + + +
Sbjct: 436 LASRTQQSTGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHANQAGESLDAISALIGT 495

Query: 474 VSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQW 533
           ++SM+ QIA AA EQT V+++I R ++ I ++   ++    +   + + L  LA +L++ 
Sbjct: 496 INSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTARELNGLAEQLQRL 555

Query: 534 AAHFEV 539
              F +
Sbjct: 556 VGQFRI 561