Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  191 bits (484), Expect = 9e-53
 Identities = 144/490 (29%), Positives = 252/490 (51%), Gaps = 21/490 (4%)

Query: 59  AQEGKMSEPEAKALATRLMRNNLYKDNEYVY-VADENMTFVATPLDPQLHDTSFHDFKDG 117
           + +G  ++ +A   A  L +   +    Y Y +  EN     T ++  +         DG
Sbjct: 142 SDDGTPAQRDAIVQAMTLFQKMRFDLRGYTYSLKAENRAPAETSMNTVIEFVRNLQGFDG 201

Query: 118 KGNSVGRLIQDVLRHQSGKLVEYTWTQKQADGSIEEKLSIARKTPHWG--WVVGTGIGFN 175
           +   +  L+  ++ +Q+  L ++T  Q + D      L+ A  T   G  +     +  N
Sbjct: 202 QSAIIKHLVDSMISYQN-TLNQFTAAQARID------LAQAGITKDIGILFECADKLSEN 254

Query: 176 EVNARFWSTAQWQLSLCVVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGRIRR 235
           +VN R    +Q ++ L V +  A++   L A     LI+G   + ++ A + VA G +  
Sbjct: 255 QVNLRVEDVSQAKMLLSVWLIAALIMSALAAWVITNLIVGPLRDTLKLA-ERVADGDLTH 313

Query: 236 EFVIKAPKE--SIYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELT---- 289
             V+    E   + G++ +M+ +L +L+  L   +    +++A A  +  ++ E T    
Sbjct: 314 NQVVTRKDELGQLQGSMMRMTGNLRELIGGLRDGV----TQIASAAEQLSAVTEQTSAGV 369

Query: 290 DSQQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLA 349
           +SQ+  T  +ATAM EM+++  +VA +A   +     A ++++    ++   V+ I+ LA
Sbjct: 370 NSQKNETDQVATAMHEMSATVQEVARNAEQASHAAVNASKEAREGDGVVSKAVAQIEKLA 429

Query: 350 TQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 409
           T++  + +A+ DL  +   I  VLDVI  +AEQTNLLALNAAIEAARAGE GRGFAVVAD
Sbjct: 430 TEVTHSKSAMDDLKNESNKIGGVLDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVAD 489

Query: 410 EVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVS 469
           EVR+LA RTQTST+EI  +I  L   +      +      + +SV+ + NA  ++  +  
Sbjct: 490 EVRSLAQRTQTSTEEIAALISGLHTRTAQVATILDNSQALTANSVELTRNAGVSINNMTQ 549

Query: 470 ALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARE 529
           A+ ++ +M+HQIA AA EQ+ V+++I R +  + +   + +    E+  S+  L +L   
Sbjct: 550 AISTIETMNHQIAAAAEEQSAVAEEINRSVLNVRDISEQTASASEETAASSVELARLGVH 609

Query: 530 LEQWAAHFEV 539
           L+   + F V
Sbjct: 610 LQSLVSRFRV 619