Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  178 bits (452), Expect = 5e-49
 Identities = 122/361 (33%), Positives = 196/361 (54%), Gaps = 14/361 (3%)

Query: 188 QLSLCVVIAVAILSLLLVAIRKILLI---IGGEPNEVRSAVQAVAQGRIRREFVIKAPKE 244
           Q ++  +++VA++ +LLV I    LI   I    N    A + +A G +  +       E
Sbjct: 326 QTAVVQLLSVALV-VLLVGIFAAFLITRQITVPLNSTVIAARRIADGDLTHDSSTTRQDE 384

Query: 245 S--IYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDS----QQQSTAM 298
              +   +Q M+ SL  L+  +   +    +++A A  +  +++E T +    Q+     
Sbjct: 385 LGLLQNTMQHMTVSLRGLIGGIGNGV----TQIATAAEQLSAVSEQTSAGVTLQKNEVDQ 440

Query: 299 IATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTA 358
           +ATAM EMAS+  +VA +  D +    QA +++ H   ++ +    I  LA ++Q    A
Sbjct: 441 VATAMNEMASTVQEVARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEVQQLGEA 500

Query: 359 VADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRT 418
           +  L  D   I  V+DVI  +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RT
Sbjct: 501 MQRLTEDSGKIGSVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRT 560

Query: 419 QTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMS 478
           Q ST EI+ +I  LQ+G+  A   +    Q ++ +V  +  A  AL  I  ++ ++  MS
Sbjct: 561 QNSTTEIEALIQALQKGTGAASGLMDASLQRTEGTVVLARQAEQALVEINQSIGTIEQMS 620

Query: 479 HQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFE 538
            QI+ AA +Q+ V+++I R +  + +   + +    +S  ST  L +L  +L+   A F+
Sbjct: 621 QQISAAAEQQSAVTEEINRSVLSVRDIADQSASATEQSAASTVELARLGSDLQSMVARFK 680

Query: 539 V 539
           +
Sbjct: 681 I 681