Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  191 bits (485), Expect = 6e-53
 Identities = 123/354 (34%), Positives = 200/354 (56%), Gaps = 7/354 (1%)

Query: 189 LSLCVVIAVAILSLLLVA--IRKILLIIGGEPNEVRSAVQAVAQGRIRREFVIKAPKESI 246
           L L       +LS++L A  IR +   +G EP +V  A++ +A G +++      P +S+
Sbjct: 194 LMLLATAFAVLLSIVLSAFIIRFVKKTLGAEPVDVAEAIRRLAAGDLQQTITTAYP-DSV 252

Query: 247 YGAVQQMSSSLADLVAKLEQSM--VALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMT 304
            G ++   S L++ +  +  +   V+  S +  A + A +   +   Q +    +ATA++
Sbjct: 253 MGVLRTALSRLSETITDVRMAAQEVSQSSSVLSAASSANNAQIMV--QTREAEQVATAIS 310

Query: 305 EMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDL 364
           EMA++ ++V+  A   A     AD +      L+  T + I+ LA  L   ++ V  +  
Sbjct: 311 EMAATVSEVSGYASQAADAARLADSEVASGNSLVEGTTTAIEQLAATLTETTSTVEQVSR 370

Query: 365 DVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKE 424
             + I KV++VI  IA QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ ST+E
Sbjct: 371 HGEEIEKVIEVINSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRSLANRTQLSTQE 430

Query: 425 IQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATA 484
           IQ MI  LQ G+  A Q ++   +    +V+++ NA SAL+ I   + +++ M+ QIA+A
Sbjct: 431 IQNMISTLQGGTETAAQNMRDSCELVNRAVEQTRNAQSALSRINQEVSAINHMNAQIASA 490

Query: 485 AAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFE 538
           + +Q+ V++D+A  I  I +S  K +    +   +++ L +LA  L +  A F+
Sbjct: 491 SVQQSAVAEDVAMNITSIHDSTLKSANGSQQVATASEELAQLADRLTRKVAFFK 544