Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  199 bits (505), Expect = 3e-55
 Identities = 126/359 (35%), Positives = 211/359 (58%), Gaps = 11/359 (3%)

Query: 189 LSLCVVIAVAILSLL--LVAIRKILLIIGGEPNEVRSAVQAVAQGRIRREFVIKA-PKES 245
           LS+   + +AIL ++  L+ IR IL  IGGEP+ V +  + +A+G +     I A    S
Sbjct: 197 LSIAATLTIAILGVIVTLMTIRSILSAIGGEPSTVATITRTIARGDLSSTINISANDTSS 256

Query: 246 IYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAE--LTDSQQQSTAM--IAT 301
           +  AV  M + L D + ++  S     ++LA A     +I E  +   Q+Q+  +   AT
Sbjct: 257 VAAAVVAMQTQLRDTLQQISSSA----TQLAAAAEEMTAITEDGVQGIQRQNNEIDQAAT 312

Query: 302 AMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVAD 361
           A+ EM S+  +VA +A  TA ++  A   +Q    L+  TV++I  ++T +Q  +T + +
Sbjct: 313 AVNEMTSAVEEVARNAEHTARSSSNATSAAQDGLGLVKKTVTSINTMSTDVQKTATLIGE 372

Query: 362 LDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTS 421
           L    ++I KVLDVI  +AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ S
Sbjct: 373 LAGQSRDIGKVLDVIRGLAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQS 432

Query: 422 TKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQI 481
           T EI++++ N+Q G+  A+ +++   + +  ++  +E A  +L +I +A+  ++ ++  I
Sbjct: 433 TSEIERLVTNIQNGTERAVGSMRGNTELASETLGIAEGANESLTVISAAVSEINDLNLVI 492

Query: 482 ATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEVT 540
           A+AA +Q  V+ ++ R +  I +  ++ S    ++ ++++ L+ LA +L      F ++
Sbjct: 493 ASAAQQQAHVAREVDRNLMNIRDLSAQSSSGAQQTASASRELSTLALDLNNIVGRFRLS 551