Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  195 bits (496), Expect = 4e-54
 Identities = 128/361 (35%), Positives = 195/361 (54%), Gaps = 9/361 (2%)

Query: 183 STAQWQLSLCVVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGRIRREFVIKAP 242
           ++A  +  + VVIA+ +  ++  A+ + L       +EV  A+  +A G +  +      
Sbjct: 318 NSASLRTLILVVIAIVVAVVISFAVVRPLK---RSLDEVNGALNVLASGDLTHKLDDTGH 374

Query: 243 KESIYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELT----DSQQQSTAM 298
            E  +  + +  + L D +  L  S++   ++LA A     +I   T      Q+     
Sbjct: 375 DE--FAELSRNCNRLVDSLRSLIASILDRSNQLAAAAEETSAITSQTTIGIQEQKSQVDQ 432

Query: 299 IATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTA 358
           +ATA TE++SSA+QV  SA D      QAD+++QH + +       I  LA ++  AS  
Sbjct: 433 VATATTELSSSAHQVNMSADDALSQIKQADEETQHMRTIADENKRTILSLADEVAKASKV 492

Query: 359 VADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRT 418
           +  +  D  +I  +LDVI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RT
Sbjct: 493 INKVHSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRT 552

Query: 419 QTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMS 478
           Q ST+EIQQMI  LQ+G++ A+  +Q+    +QS V+++E A  AL  I  ++       
Sbjct: 553 QDSTREIQQMIEVLQQGTQQAVAVMQLGQNQAQSCVEKTEQANQALQTISHSVHKAYDAG 612

Query: 479 HQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFE 538
             IA AA EQ  VS  ++ ++  I     + +    ++  S+  + +LA EL+     F 
Sbjct: 613 THIAQAAQEQNLVSQQVSEKLEHIAAISEETALGAEQTAKSSHEVARLAEELQSSVKEFR 672

Query: 539 V 539
           V
Sbjct: 673 V 673