Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 736 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  182 bits (461), Expect = 5e-50
 Identities = 143/531 (26%), Positives = 244/531 (45%), Gaps = 41/531 (7%)

Query: 10  LSAIILAALLALTATGLWTLRVASNL---DNKARVTELFNSAYSILTEVEKLAQEGKMSE 66
           L A++L +LL + AT +  L    ++   D +A+V  + + A+S   ++   A  G ++ 
Sbjct: 37  LFALVLVSLLGIGATAILALSQVHDVMMEDRRAKVRAIVDLAFSQTADLADRAARGAITS 96

Query: 67  PEAKALATRLMRNNLYKDNEYVYVADENMTFVATPLDPQLHDTSFHDFKDGKGNSVGRLI 126
             A+A A  ++R   Y   EY+++ D     V  PL P++        KD KG ++   +
Sbjct: 97  EAAQAGAIEILRRARYDGGEYLFIIDTKGRSVMHPLAPEMEGKDMSGVKDAKGTAMFAEM 156

Query: 127 QDVLRHQSGKLVEYTWTQKQADGSIEEKLSIARKTPHWGWVVGTGIGFNEVNARFWSTAQ 186
             +   Q      Y W Q+ A G+   K+S  R+ P W WV+G+GI  ++V A F   A 
Sbjct: 157 ARLAVSQGSGFFAYEW-QRGAQGTASPKISYVRRLPQWDWVIGSGIYIDDVEAAFTRQAL 215

Query: 187 WQLSLCVVIAVAILSLLLVAIRKI---LLIIGGEPNEVRS-----AVQAVAQGRIRREFV 238
              ++   +   +L L LV  R I   L+ + G   ++ S     A+   A    RR+ V
Sbjct: 216 IFAAVVAAVVAVLLGLSLVIGRGIAGPLVAMTGRMRKMASGDLETAIPGEATADQRRDEV 275

Query: 239 IKAPKESIYGAVQQMSSSLADLVA-----KLEQSMVALRSELAGAGTRA--KSIAELTDS 291
                  + GA+     +L D        + E+    +R +      RA   ++  L D 
Sbjct: 276 -----GEMAGALVVFRETLRDAKRLAEEHRHEEEQKHIRRQQVDEQIRAFEMTVVRLLDG 330

Query: 292 QQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQ 351
              +   + +  T +   A      A + A + + A    +          ++IQ +A Q
Sbjct: 331 LVSADQSVRSTTTRLVDGARDTMSEANEVAASAEHASANVETVASAAEELSASIQEIARQ 390

Query: 352 LQTAS--------------TAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARA 397
           ++ +S                +A+L+  V  I  ++ +I DIA QTNLLALNA IEAARA
Sbjct: 391 VEQSSGVARRAVEETGEATKGIAELEERVGQITDIVKLISDIASQTNLLALNATIEAARA 450

Query: 398 GEQGRGFAVVADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQES 457
           G+ G+GFAVVA+EV+NLA +TQ +TK+I   I +++E +  +++ I+     S+   +  
Sbjct: 451 GDAGKGFAVVAEEVKNLANQTQKATKDITGRIADVEEATTRSVEAIR---DVSKVIGEIH 507

Query: 458 ENAASALALIVSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSK 508
           E +AS  A +     +   ++  +  AA    +VS  I R     EE+ S+
Sbjct: 508 EISASISAAVEEQGAATREIARNVDEAATGTNRVSSAIGRVRAAAEEANSE 558