Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  182 bits (462), Expect = 3e-50
 Identities = 111/294 (37%), Positives = 167/294 (56%), Gaps = 7/294 (2%)

Query: 253 MSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTD-------SQQQSTAMIATAMTE 305
           +S+ L D+   L   +  +          A ++ E T         QQ  T   ATAM E
Sbjct: 248 ISTGLNDVFRHLRGILKGVAEAANSVSDSALALNEFTQISNARIQQQQAETEQTATAMNE 307

Query: 306 MASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLD 365
           M ++ N+VA S    A +   AD+ + +   ++  ++S++Q L+ Q+Q+ S  +  L  +
Sbjct: 308 MTATVNEVAQSTTAAADSARNADRFAANGNDIVQLSISSMQALSMQIQSTSEVITHLSHE 367

Query: 366 VKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEI 425
            ++I  VL VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RTQ +T+EI
Sbjct: 368 SQHIGSVLSVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQEATQEI 427

Query: 426 QQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAA 485
           + MI  LQ G   A+  + +  +    + Q++  A  AL  IV+++++++ M+  IATAA
Sbjct: 428 ETMIETLQSGVNEAVTAMDVGIKQVDDANQQTNKAGEALQEIVASVDNITEMNTHIATAA 487

Query: 486 AEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
            EQ+ V++ I R I  I +  S+ +   +E  +S   LT LA  + Q    F +
Sbjct: 488 EEQSSVAESINRSIIAISDIASQSTESALELGHSIAQLTSLADSMRQQVTTFRL 541