Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  189 bits (480), Expect = 2e-52
 Identities = 114/274 (41%), Positives = 170/274 (62%), Gaps = 4/274 (1%)

Query: 270 ALRSELAGAGTRAKSIAELTD----SQQQSTAMIATAMTEMASSANQVADSARDTAFNTD 325
           A  S LA A      ++  T      QQQ T +IATA+ E  ++  +VA SA   A  + 
Sbjct: 299 ASTSRLASAAEENAVVSTQTQRNVLDQQQQTQLIATAIHEFTATVREVAQSAASAATASQ 358

Query: 326 QADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNL 385
            A+  +   Q ++  +++ I+ LA +L  AS A+  L      I  V+DVI  I+EQTNL
Sbjct: 359 DANGAAHGAQGVVDESIAVIEALAQELSRASEAMTLLAQHSNEIGTVVDVIQAISEQTNL 418

Query: 386 LALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQI 445
           LALNAAIEAARAGEQGRGFAVVADEVR+LA RTQ ST+EIQ+MI  LQ+G+R+++Q +Q 
Sbjct: 419 LALNAAIEAARAGEQGRGFAVVADEVRSLAKRTQDSTEEIQKMIQRLQQGARDSMQMMQS 478

Query: 446 CGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEES 505
             +  + SV +S     AL  I++++E +++++ QIATA+ EQ+ V+++I   I  I E 
Sbjct: 479 GTEQVKLSVDKSLMVRDALQQILNSIEEINALNAQIATASEEQSSVTEEININITNISEI 538

Query: 506 GSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
             + +    +S ++T+ L +LA  +E   AH++V
Sbjct: 539 SDQTAEGARQSSDATEDLARLAESMEADIAHYKV 572