Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  189 bits (481), Expect = 2e-52
 Identities = 117/372 (31%), Positives = 206/372 (55%), Gaps = 6/372 (1%)

Query: 172 IGFNEVNARFWSTAQWQLSLCVVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQG 231
           IG ++ NA  ++     L+  +V +  +L   +  +  +L ++      +++ V  +++G
Sbjct: 262 IGLDKSNA--YAVVDQALTSALVSSAIMLLCAISILLGVLYLLYRPILSLKAMVTELSKG 319

Query: 232 R----IRREFVIKAPKESIYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAE 287
                 R E   +     I   + Q  ++L  ++ ++ Q+   +   +       ++   
Sbjct: 320 NGDLTKRLEIHCEDDLGQISMGINQFIANLQAMMREVLQASAHISGSVERLNGETETNRH 379

Query: 288 LTDSQQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQG 347
           +  +  + T  I  A+ EM+++AN VA +  +TA  T   ++Q+  +++++      +  
Sbjct: 380 ILSAHTKETEQIVAAVEEMSATANDVAQNGSETASFTQLTNEQALASKQVVAQATETVNR 439

Query: 348 LATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVV 407
           L  +++  +  +  +D D  NI +VL VIGDIA+QTNLLALNAAIEAARAGEQGRGFAVV
Sbjct: 440 LVREVEHTADKIGQIDRDTINITQVLKVIGDIADQTNLLALNAAIEAARAGEQGRGFAVV 499

Query: 408 ADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALI 467
           ADEVR LA RTQ ST EI++ + NL++ S +AI ++++  QT   +   +E  A+ L  I
Sbjct: 500 ADEVRALAARTQDSTAEIEETLSNLRDASNSAIHSMEVTKQTCLETASTTERVATDLDAI 559

Query: 468 VSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLA 527
            S++  ++ ++ QIATAA EQ+ VS +I R ++ I +  ++L+R    S N T  L    
Sbjct: 560 GSSVNQINDLNTQIATAAEEQSSVSAEITRNMSAICDMANELARSGESSRNETVNLATAN 619

Query: 528 RELEQWAAHFEV 539
           ++LEQ    F++
Sbjct: 620 QQLEQIVGQFKL 631