Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  221 bits (563), Expect = 6e-62
 Identities = 158/545 (28%), Positives = 264/545 (48%), Gaps = 10/545 (1%)

Query: 1   MKLKTQAYLLSAIILAALLALTATGLWTLRVASNLDNKARVTELFNSAYSILTEVEKLAQ 60
           ++LK++ ++L A+ +  +  +T  G   +    +  ++  V     +AY+I+   + L +
Sbjct: 5   LRLKSRMFILIALAVFGMGTITILGALGVSRDLHEGHQQTVRAAVEAAYNIIAGYQALEK 64

Query: 61  EGKMSEPEAKALATRLMRNNLYKD----NEYVYVADENMTFVATPLDPQLHDTSFH-DFK 115
            GKMS  EA+  A   +R   Y      +EY ++       V  P+ P+        + +
Sbjct: 65  AGKMSRSEAQKAAVESVRMARYGGTDGRSEYFHIWTPEGVTVMHPIRPEWEGKDVTGEVR 124

Query: 116 DGKGNSVGR-LIQDVLRHQSGKLVEYTWTQK-QADGSIEEKLSIARKTPHWGWVVGTGIG 173
           D KG    R +I   ++   G  VE  +    Q      +KL   +    WGWVVG+GI 
Sbjct: 125 DVKGRPTLRNIIDGAIKQPDGAFVETLFPHPGQPAEKAVDKLQYVKLFAPWGWVVGSGIY 184

Query: 174 FNEVNARFWS-TAQWQLSLCVVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGR 232
            ++V A     T +  L   V++A+      LV  R +L  +GGEP      ++  A G 
Sbjct: 185 LDDVQAEVRQRTLEDSLMALVLLALVAAGTYLVG-RSVLQQVGGEPGVAIDLMRQAADGD 243

Query: 233 IRREFVIKAPKESIYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQ 292
           +    V  AP  S+  +   M +SL  +V ++  +   L        T A+ ++   + Q
Sbjct: 244 LTVR-VETAPAGSMLASFSHMVASLRQVVKEIGSNSSQLTHNAERISTAAREVSLAGEQQ 302

Query: 293 QQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQL 352
             +T+ +A A+ E+  S N ++D++RDT  N+ ++ Q +   +  + N    I+ +A  +
Sbjct: 303 SDATSAMAAAIEELTVSINHISDNSRDTERNSSESAQLAAEGETRVANASGAIKAIAGTV 362

Query: 353 QTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 412
             AS  + DL+   + ++ +  VI  IA QTNLLALNAAIEAARAGEQGRGFAVVADEVR
Sbjct: 363 SDASGRIRDLETQTREVSGIASVISAIAAQTNLLALNAAIEAARAGEQGRGFAVVADEVR 422

Query: 413 NLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALE 472
            LA RT  +T EI+QMI ++Q  +   +Q +       +S V  +E AA +L  I    E
Sbjct: 423 QLAERTAKATVEIEQMISHIQTDTDMVVQAMGAALPQVESGVALAEEAAQSLRQIREGSE 482

Query: 473 SVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQ 532
                   +A A  EQ+  S  IA+R+  + +   + S  +  +  + + + ++A  L+ 
Sbjct: 483 LTLHRVRDVAEATMEQSSASTSIAQRVEQVAQMVEETSAAMKNTAETAEAVEQIASRLDA 542

Query: 533 WAAHF 537
               F
Sbjct: 543 LVQRF 547



 Score = 37.4 bits (85), Expect = 1e-06
 Identities = 41/187 (21%), Positives = 75/187 (40%), Gaps = 24/187 (12%)

Query: 369 IAKVLDVIGDIAEQTNLLALNA------AIEAARAGEQGRGFAVVADEVRNLAGRTQTST 422
           +A +  V+ +I   ++ L  NA      A E + AGEQ       +D    +A   +  T
Sbjct: 264 VASLRQVVKEIGSNSSQLTHNAERISTAAREVSLAGEQQ------SDATSAMAAAIEELT 317

Query: 423 KEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVS-----------AL 471
             I  +  N ++  RN+ ++ Q+  +  ++ V  +  A  A+A  VS             
Sbjct: 318 VSINHISDNSRDTERNSSESAQLAAE-GETRVANASGAIKAIAGTVSDASGRIRDLETQT 376

Query: 472 ESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELE 531
             VS ++  I+  AA+   ++ + A       E G   + V  E     +   K   E+E
Sbjct: 377 REVSGIASVISAIAAQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLAERTAKATVEIE 436

Query: 532 QWAAHFE 538
           Q  +H +
Sbjct: 437 QMISHIQ 443