Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  169 bits (428), Expect = 2e-46
 Identities = 95/251 (37%), Positives = 151/251 (60%)

Query: 249 AVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMTEMAS 308
           A+Q  +S L  ++ +   S   +  E   +  + + I   + SQ      +ATAM +M +
Sbjct: 229 ALQMQNSELKSVLGRARDSCDKVTQEAKVSAAKGEEIQSTSQSQLAEIEQVATAMQQMTA 288

Query: 309 SANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKN 368
           +   ++ +  D A  +  A +Q+ +  K + +T+ +IQ +A QL   S  + +L+   K+
Sbjct: 289 TLVDMSSNCADAASASQMASEQTINGDKTVVSTIHSIQTMAQQLHATSKVITELEGHSKD 348

Query: 369 IAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQM 428
           I +VLDVI  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT  +TKEI  M
Sbjct: 349 IGRVLDVIQGIAEQTNLLALNAAIEAARAGELGRGFAVVADEVRALAKRTHDATKEIHSM 408

Query: 429 IHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAEQ 488
           I+ LQ G+  A++++    + +   +  ++ A +AL  I  A+ +++ M+H IA+A  EQ
Sbjct: 409 INLLQLGTNKAVRSMHEGVEAASECITTADLAGAALRTIREAIATITDMNHHIASAVEEQ 468

Query: 489 TQVSDDIARRI 499
           + V++++ R +
Sbjct: 469 SSVANEMNRSV 479