Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  202 bits (514), Expect = 3e-56
 Identities = 115/351 (32%), Positives = 203/351 (57%), Gaps = 7/351 (1%)

Query: 191 LCVVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGRIRREFVIKAPKE--SIYG 248
           + V I  ++LS L ++ R + ++     ++++  V+ +A G + ++  I    E  ++  
Sbjct: 182 ILVAIVASLLSALFMSRRLVNIV-----HQIKRVVEHLADGDLTQKTQISGQNELCALGA 236

Query: 249 AVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMTEMAS 308
            + ++   L  +++ + Q+   +  ++     ++ +      +    T  + TAMTEM++
Sbjct: 237 DLDRVIDHLRHMISDIAQASEHMSDQIGQLNVQSNANTHALQTHAVETDQVVTAMTEMSA 296

Query: 309 SANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKN 368
           +A+ VA  A   A  T QA++Q+  ++K +    + +  L  ++ TA+  +A+++ + ++
Sbjct: 297 TAHNVAGDAASAARFTQQANEQADKSKKAVEQAANTVVALVGKVDTAAHTIAEMNENTRH 356

Query: 369 IAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQM 428
           IA +LDVIGDIA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RTQ ST EI QM
Sbjct: 357 IATILDVIGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTAEINQM 416

Query: 429 IHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAEQ 488
           +  L+ G+ +A+  +    Q+ Q +   +     +L  + + +  ++ +S+QIATAA EQ
Sbjct: 417 LERLRTGANSAVNAMDETKQSCQDAADTTTLVTESLETLTTYVFDINGLSNQIATAAEEQ 476

Query: 489 TQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
           + VS++I R +N I E   +L++    + NS  +L     +L    +HF +
Sbjct: 477 SAVSEEINRNLNTIREMVEELNQSGKATLNSATSLAATKEQLTGVVSHFRL 527