Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  192 bits (487), Expect = 4e-53
 Identities = 118/329 (35%), Positives = 183/329 (55%), Gaps = 14/329 (4%)

Query: 220 EVRSAVQAVAQGR--IRREFVIKAPKESIYGAVQQMSSSLADLVAKLEQSMVALRSELAG 277
           E   A+  +A+G   + R   +K+  E     + Q++ +      K+  ++  +    + 
Sbjct: 311 ETTDALNDIAEGEGDLTRRIEVKSKDE-----MAQLAQAFNRFAEKIHATVAQVSDSTSL 365

Query: 278 AGTRAKSIAELTDSQQQ-------STAMIATAMTEMASSANQVADSARDTAFNTDQADQQ 330
             T A+ ++ +T   QQ        T  +ATAM EMA++  +VA +A D A     A + 
Sbjct: 366 LATSAEEMSAITHETQQMANRQHLETEQVATAMNEMAATVQEVAHNATDAADAATHASES 425

Query: 331 SQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNA 390
           ++  + L+   +S I  LA ++  A+ A+ +L+ +   I  VL VI +IA+QTNLLALNA
Sbjct: 426 TEQGKLLVEKVISTISLLADEIAQAANAINELERNTTQIDSVLVVIRNIADQTNLLALNA 485

Query: 391 AIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTS 450
           AIEAARAGEQGRGFAVVADEVR LA RTQ ST EIQQMI  LQ+ ++  + ++     T+
Sbjct: 486 AIEAARAGEQGRGFAVVADEVRTLASRTQASTTEIQQMIETLQQSAKATVSSMNTSTATT 545

Query: 451 QSSVQESENAASALALIVSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLS 510
           QS V     A SAL  I  A+ ++S M+ QIA+AA EQ  VS +I + +N I +  +  +
Sbjct: 546 QSCVSLVHEAGSALEAITQAVSTISQMNIQIASAANEQCAVSAEINKNVNNINDIATNAT 605

Query: 511 RVVMESHNSTQTLTKLARELEQWAAHFEV 539
              M++  +   L +L+  L    + F++
Sbjct: 606 ESAMQTARAGDELAQLSMRLTTLLSQFKI 634