Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  193 bits (491), Expect = 1e-53
 Identities = 122/376 (32%), Positives = 208/376 (55%), Gaps = 22/376 (5%)

Query: 176 EVNARFWSTAQWQLSLCVVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAV-----AQ 230
           ++ A   +T Q Q+S+ +   VAI++L++      +++     N +R     +       
Sbjct: 177 DLQASEQATTQTQISVTIATLVAIVALVIAYFGPKIIV-----NAIRDITDRINDIVDGD 231

Query: 231 GRIRREFVIKAPKESIYGAVQQMSSSLADLVAKLEQSMVALRSE-------LAGAGTRAK 283
           G + +   I    E     + +++++    VA+L+Q ++A+ S+       +    T++ 
Sbjct: 232 GNLTQRIPITRQDE-----IGELANAFNLFVAQLQQMVIAIISQTKDVSQTVENLATKST 286

Query: 284 SIAELTDSQQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVS 343
           +   ++  Q+Q    I TA+ EM+++  +VA +A  TA    + + Q+   + ++  +V+
Sbjct: 287 TTIGISYEQEQFVDTIVTAVNEMSAAVREVASNALHTATEITKVNDQTIEGKNILTQSVN 346

Query: 344 NIQGLATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRG 403
           +IQ L+  ++ A   +  L ++  NIA VLDVI  IAEQTNLLALNAAIEAARAGEQGRG
Sbjct: 347 HIQQLSESVKQAVAVIEKLSVNSANIASVLDVIRSIAEQTNLLALNAAIEAARAGEQGRG 406

Query: 404 FAVVADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASA 463
           FAVVADEVR LA RT+TST++IQ+MI  LQ G  +A+++I+     + S+V  +     A
Sbjct: 407 FAVVADEVRTLASRTETSTQDIQRMIEELQRGVNDAVKSIESGASLTNSTVTLASQTQDA 466

Query: 464 LALIVSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTL 523
           L  I+++   VS MS Q ATA  EQT V+++I R +  + +     + V+ E+       
Sbjct: 467 LDEILNSTSKVSEMSTQTATATEEQTHVTEEINRNLTELSDKTRYCNTVIQETQQIVVNT 526

Query: 524 TKLARELEQWAAHFEV 539
             +   L++  + F+V
Sbjct: 527 QTICSNLQKEVSRFKV 542