Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  172 bits (436), Expect = 3e-47
 Identities = 96/251 (38%), Positives = 153/251 (60%)

Query: 249 AVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMTEMAS 308
           A+Q  +S L  ++ +   S   +  +   +  + + I   + SQ      +ATAM +M +
Sbjct: 229 ALQMQNSELKSVLGRARDSCDNVSQQAKISAAKGEEIQGTSQSQLAEIEQVATAMQQMTA 288

Query: 309 SANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKN 368
           +   ++ +  D A  +  A  Q+ +  K + +T+ +IQ +A QLQ  S  + +L+   ++
Sbjct: 289 TLGDMSSNCADAASASQMASLQTINGDKTVVSTIQSIQAMAQQLQETSQVITELEGHSRD 348

Query: 369 IAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQM 428
           I +VLDVI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT  +TKEI  M
Sbjct: 349 IGRVLDVIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAQRTHDATKEIHTM 408

Query: 429 IHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAEQ 488
           I+ LQ+G+  A++++Q     +   +  ++ A +AL  I  A+ +++ M+H IA+A  EQ
Sbjct: 409 INLLQQGTHKAVRSMQEGVDAAGECITTADLAGAALRTIREAITTITDMTHHIASAVEEQ 468

Query: 489 TQVSDDIARRI 499
           + V++++ R +
Sbjct: 469 SSVANEMNRSV 479