Pairwise Alignments

Query, 284 a.a., molecular chaperone DjlA from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., DnaJ domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  238 bits (606), Expect = 1e-67
 Identities = 125/284 (44%), Positives = 185/284 (65%), Gaps = 22/284 (7%)

Query: 1   MHIFGKILGAFFGFLFGGPFGAIFGIFLGHQFDKARRLNQAGFQSGTFGAGPSQAERQEE 60
           M  +GK  G   GF+FG  FGA+ G++LGH +DK       G  S +   G ++  RQ  
Sbjct: 1   MRFWGKFFGFVIGFMFGRFFGALLGLWLGHLYDK----RPGGGASFSQILGQAK-NRQGI 55

Query: 61  FFKSAFSVMGHVAKAKGQVTKEEIQLATIMMDRMNLTLEQKRAAQDAFRDGKESDFPLEQ 120
           FF + F+VMGHVAKA G+VT+ +I++AT++MD+M LT + ++ AQ AFR+GKE DF L  
Sbjct: 56  FFNTTFAVMGHVAKASGRVTETDIRIATLLMDQMRLTGDARKEAQQAFREGKEPDFDLCS 115

Query: 121 VLERVKIATGGRFDLLQFFLELQVSSAFADGDVHPSERQVLHRIARGLGFSSEQLERRLR 180
            L+  +  T GR +L+Q F+E+Q+ +A +DG++  +E  +L  +A+ LG+  +QL+  L+
Sbjct: 116 SLQAFRAVTQGRQELVQMFIEIQIQTALSDGELDAAEHAILMTVAQELGYGRQQLDELLK 175

Query: 181 MQEAAFRFQQGGGFGGSQQQSHSGQQWQQPSSRHQLADAYEVLGVSESASAQEVKRAYRK 240
             +A FRF           Q+ SG       ++  + DAY +LG++  A+ QEVKRAYRK
Sbjct: 176 RWQAEFRF----------HQTSSG-------NKTSITDAYHLLGITAEATDQEVKRAYRK 218

Query: 241 LMNEHHPDKLMAKGLPPEMMNVAKEKSQQIQHAYELIRKEKGIK 284
           LMNEHHPDKL+AKGLPPEMM +A  K+Q IQ AY+ ++ E+G++
Sbjct: 219 LMNEHHPDKLVAKGLPPEMMEIANRKAQDIQAAYDRVKSERGMR 262