Pairwise Alignments

Query, 787 a.a., LPS assembly protein LptD from Vibrio cholerae E7946 ATCC 55056

Subject, 922 a.a., Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor from Pseudomonas fluorescens FW300-N2E2

 Score =  303 bits (776), Expect = 3e-86
 Identities = 212/735 (28%), Positives = 340/735 (46%), Gaps = 63/735 (8%)

Query: 42  GEQCLVNQPEPTNPGQQPINVEADKLEAING---------QKATYSGNVVVVQGKKRIAA 92
           G  C     EPT PG      ++D    +           Q AT +G+VV+ QG  ++ A
Sbjct: 127 GPYCSGAYIEPTRPGMNDKTAKSDAPTFLGAKASRYQQEEQVATLAGDVVMRQGSMQVEA 186

Query: 93  DNVTLHQQENVVVAEGNVQFSDGEIKTHSTKATNHLNTDEMTLENTRYQFLCEPGRGEAV 152
           D  +L+Q EN     GNV+  D         A   L+T E  ++N  Y       RG A+
Sbjct: 187 DEASLYQAENRGELSGNVRVRDNGALIVGDHADVQLDTGEAKVDNAEYVMHKSRIRGNAL 246

Query: 153 YVSKTGKAVYEIEDGSITSCPDGDNAWRMRASSIDVDQNEEIATFYNPRLEVQNVPVFYL 212
           Y  +   A+  ++DG+ T+C    NAW ++ ++I ++      T  N  L V++ PV Y 
Sbjct: 247 YAKRAENAIIRLKDGTYTTCEPNSNAWTLKGNNITLNPATGFGTATNVTLRVKDFPVLYT 306

Query: 213 PYLTVPIGDTRKTGFLYPTASYGSRNGYSFEVPIYWNLAPQYDLETTFNYMQKRGTQLNS 272
           PY+  PI D R++GFL PT   GS  G+    P Y+NLAP YD      YM KRG  +  
Sbjct: 307 PYIYFPIDDRRQSGFLPPTIGSGSDTGFLLVTPYYFNLAPNYDATLYPRYMAKRGLLMEG 366

Query: 273 VFRYLTDFGAGQIKSEYLAD-DQLHTELGD----RWAFQYEHNGIFQQAWKFEIDYSKVS 327
            FRYLT    GQ  + YL D D   +   D    R+ + ++H G        E+DY+K+S
Sbjct: 367 EFRYLTKSSEGQFGAAYLNDEDDERSGQSDYDKTRYMYNWQHKGGLDSRVLTEVDYTKIS 426

Query: 328 DINYFSDLDSG-VGNREDGQLIQEGRATYRSDNWDSALLVRDFQLLTKDTTSTNLPYRLM 386
           D  YF DL S  +G   + ++ Q+G  +YR DN+ + L  + +QL    T S   PY  +
Sbjct: 427 DPYYFQDLKSDQIGIETNDRVNQQGIVSYRGDNYVARLNAQAYQLA---TISKITPYNRL 483

Query: 387 PQLSYNYYAPETMKYLDLDLVSHVSRFETDAR----------------------GKPSAT 424
           PQ++++   PE    LD    + + RF+ D R                       + +  
Sbjct: 484 PQITFSGALPEHPYGLDFAYKTELVRFDRDLRTGNYTDEDGNVEPWLDTNVRGLARANGN 543

Query: 425 RVHIEPGLKIPFSNTWGNWTTEARVLGTYYQQDLDKTTDAKL----EESVTRVIPEIRSV 480
           R+++ P + +P + ++G      +   T Y  DLD T  + +    + +  R +P     
Sbjct: 544 RMNLAPVMSLPMTASYGYLKPSLKYQYTQYDLDLDGTGKSVVGNGYDSTPNRSVPIASID 603

Query: 481 AGIVLERDTVLL-DDYTQTLEPKIQYLYVPEKYQDNIGLYDSTLLQTDYYGLFRSRKYSG 539
           +G+  +R+T     +Y QTLEP++ YLYVPEK Q +I ++D++     Y  LFR  +++G
Sbjct: 604 SGLYFDRNTQWFGTNYRQTLEPRLFYLYVPEKDQSDIPIFDTSESTFSYSSLFRDNRFTG 663

Query: 540 VDRIESANQVSYGASTRFFDSNYKERLNIAFGQIFYL-DSKLNPSNKNPDSTSD-KTSYS 597
            DR+   N++S G ++R+ + N  ER  +A GQ FY  D K+     + D+  D K+  S
Sbjct: 664 SDRVGDENKLSLGVTSRWIEENGFERQRLAVGQAFYFKDRKVQLPGIDFDTREDAKSDVS 723

Query: 598 AWAVEMDFNFADYLFYHGGIQYDIDSQAVQLGNSTLEYRVASG---YIQANYRYVAKDYI 654
            +A+E ++++           +D D+++ + G++   Y+        I A YRY   D +
Sbjct: 724 PYALEYEYHWNRDWRTTATYNWDPDTRSPRSGSAMFHYQPEDNPNKVINAGYRY-RNDQV 782

Query: 655 R--NTVGDSITNIDDITRDG----------ISQAGILAGYQLSRKWSASGQYYYDLTTDE 702
           R     G       D  R G          I Q      + +  +W+   ++ YD   + 
Sbjct: 783 RYDEATGQWQVGGGDYGRPGDADYVKDYYKIKQHDFSVIWPIVPQWNLISRWQYDYNRNR 842

Query: 703 ALEWLANLTYTSDCW 717
            LE      Y + CW
Sbjct: 843 TLEAFGGFEYDNCCW 857