Pairwise Alignments

Query, 787 a.a., LPS assembly protein LptD from Vibrio cholerae E7946 ATCC 55056

Subject, 781 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 81.6 bits (200), Expect = 1e-19
 Identities = 176/759 (23%), Positives = 276/759 (36%), Gaps = 132/759 (17%)

Query: 13  LAASISAALFAPQIQAEASVDDNRAQLPNGEQCLVNQPEPTNPGQQPINVEADKLEAING 72
           L A ++  + A  + A A   D  A+        ++  +P  P    + + A++L     
Sbjct: 16  LLAGVALHMLAIGMNAPAKAQDAAAR--------IDDLQPNIPADAKLLLTANELVYNRD 67

Query: 73  -QKATYSGNVVVVQGKKRIAADNVTLHQQENVVVAEGNVQFSD--GEI----KTHSTKAT 125
            +K T  GNV +  G  ++ A  V   Q+   ++A G++Q  +  G I    +   T   
Sbjct: 68  TEKVTVRGNVQIEYGGYKMVARQVDYDQKSGRILATGDIQLIEPGGNIVYADRMDVTDDF 127

Query: 126 NHLNTDEMTLENTRYQFLC----EPGRGEAVYVSKTGKAVYEIEDGSITSC---PDGDNA 178
            +     + +E T    L     E   GE   ++K   AVY     + T C   P+  + 
Sbjct: 128 GNGFVQALRIETTDLTRLAAETGERRNGEEFILNK---AVYT----ACTPCNTKPEHRSL 180

Query: 179 WRMRASSIDVDQNEEIATFYNPRLEVQNVPVFYLPYLTVPIGDT-RKTGFLYPTASYGSR 237
           W ++A  I  +         +   E+   P+ Y+P + +P     RK+GFL+P   Y  +
Sbjct: 181 WHIKAQRIIQNGRTRTIRLEHAYFELFGKPIAYIPVMEIPDHTVKRKSGFLFPQFRYTQK 240

Query: 238 NGYSFEVPIYWNLAPQYDLETTFNYMQKRGTQLNSVFRY--------LTDFGAGQIKSEY 289
            G    VP YW ++P  D   T   + ++G  L   FR         L   G  Q+  E 
Sbjct: 241 LGAGVGVPYYWAISPHMDATITGTGLTRQGFLLEGEFRQQFHNGLHTLNVAGISQLDREQ 300

Query: 290 LAD---DQLHT-----------ELGDRWAFQYEHNGIFQQAWKFEIDYSKVSDINYFSDL 335
                 D L T           E+  RW+F +  N + Q     + +++K  D++ F   
Sbjct: 301 FTPGTVDALETNRGMIASRGKFEINPRWSFGW--NVLVQS----DNNFAKTYDLSTF--- 351

Query: 336 DSGVGNREDGQLIQEGRATYRSDNWDSALLVRDFQLLTKDTTSTNLPYRLMP---QLSYN 392
             G        L   G+  Y          +R F    +D    ++     P    L Y+
Sbjct: 352 -DGTTYVNQAYLTGLGKRNYFD--------LRAFYFDIQDADPGSIDENKQPVAQVLDYS 402

Query: 393 YYAPETM----------------KYLDLDLVSHVSRFE----TDAR--GKPSATRVHIEP 430
           Y APE +                  LD   V  V RF     T  R  G+    R  I P
Sbjct: 403 YTAPEPILGGELNADFNLTNIKRNRLDRVNVLGVERFRGLEGTSHRLTGELEWKRTFIAP 462

Query: 431 G--LKIPFSNTWGNWTTEARVLGTYYQQDLDKTTDAKLEESVTRVIPEIRSVAGIVLERD 488
           G  +  P     G+       LG      +  T +    ++ TR     R +   +  R 
Sbjct: 463 GGLVLTPLLAARGD------ALGMNVDDPVGYTGNFTSSDAETR-----RMLTAGLEARY 511

Query: 489 TVLLDDYTQT--LEPKIQ-YLYVPEKYQDNIGLYDSTLLQTDYYGLFRSRKYSGVDRIES 545
            +L    T T  LEP  Q Y    E+Y   +   D+     D   LF   K+SG DRIE 
Sbjct: 512 PILFAGETSTHVLEPIGQLYARPDEQYAGGLPNEDAQSFVFDATNLFDRDKFSGYDRIEG 571

Query: 546 ANQVSYGAS-TRFFDSNYKERLNIAFGQIFYLDSKLNPSNKNPDSTSDKTSYSAWAVEMD 604
             + + G   T  FDS Y   L    GQ F L         N  +T D     A +  ++
Sbjct: 572 GTRANIGLRYTGSFDSGY--GLRAIAGQSFQL------GGLNSFATDDLVKAGADS-GLE 622

Query: 605 FNFADYLFYHG-----GIQYDIDSQAVQLGNSTLEYRVASGYIQANYRYVAKDYIRNTVG 659
            + +DY+   G     G+   +  +  +   S        GY+  N++  A  Y R  + 
Sbjct: 623 TDSSDYVAMLGIDAPSGLMASLSGRLDESDFSLRRADATVGYLGLNWQ-AALTYTR--IE 679

Query: 660 DSITNIDDITRDGISQAGILAGYQLSRKWSASGQYYYDL 698
              T      +D I  A   A Y+    WS  G   YD+
Sbjct: 680 AQPTYGSPFDQDEIQTA---AAYRFHEYWSVFGAVTYDI 715