Pairwise Alignments

Query, 787 a.a., LPS assembly protein LptD from Vibrio cholerae E7946 ATCC 55056

Subject, 764 a.a., organic solvent tolerance protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  452 bits (1164), Expect = e-131
 Identities = 260/762 (34%), Positives = 411/762 (53%), Gaps = 36/762 (4%)

Query: 40  PNGEQCLVNQPEP------TNPGQQPINVEADKLEAINGQKATYSGNVVVVQGKKRIAAD 93
           P  +QCLV  P P      +   ++ + + +   +A+  Q AT+ G+V   QG + I+AD
Sbjct: 25  PAPDQCLVAPPIPLPSAPQSASAEEQVEIRSVSSDAVMNQNATFEGDVQFRQGNRSISAD 84

Query: 94  NVTLHQQENVVVAEGNVQFSDGEIKTHSTKATNHLNTDEMTLENTRYQFLCEPGRGEAVY 153
              +  ++  + AEGN+ F D +    +   +  +  +  TL   +Y    +   G A  
Sbjct: 85  RANMDYEKQQLNAEGNLVFQDSQFTVTADNLSAKIKDNSATLNGAQYWLHGQQVHGNARK 144

Query: 154 VSKTGKAVYEIEDGSITSCPDGDNAWRMRASSIDVDQNEEIATFYNPRLEVQNVPVFYLP 213
           +  T      +     T+CP GD++W + A  I +D +EE    +N ++ + ++PVFY+P
Sbjct: 145 LEITKDNNLILSGTDFTTCPPGDSSWLLEAERIKIDSSEEWGEIWNAKMRIADIPVFYVP 204

Query: 214 YLTVPIGDTRKTGFLYPTASYGSRNGYSFEVPIYWNLAPQYDLETTFNYMQKRGTQLNSV 273
           Y+TVP+ D RKTGFL+P  S  + NG     P YWN+AP+YDL  T +YM  RG  L S 
Sbjct: 205 YMTVPVSDKRKTGFLFPQFSTSTTNGVEIATPWYWNIAPEYDLTLTPHYMSARGLYLQSE 264

Query: 274 FRYLT-DFGAGQIKSEYLADDQLHTELGDRWAFQYEHNGIFQQAWKFEIDYSKVSDINYF 332
           FRYL  D  AG++  EYL  D+L     DR+ + +EH G   + W+    ++ VSD NYF
Sbjct: 265 FRYLAGDAQAGRVNLEYLGSDRLLENSDDRYLYHWEHRGAIDKHWRVNAAFTDVSDNNYF 324

Query: 333 SDLDSGVGNREDGQLIQEGRATYRSDNWDSALLVRDFQLLTKDTTSTNLPYRLMPQLSYN 392
           +DLDS V    D QL + G  +Y  ++W+ +  V+D ++L +D     +PY++MPQLS+N
Sbjct: 325 NDLDSEVARATDNQLSRIGEMSYFENDWNISARVQDIKVLGED----EVPYQVMPQLSFN 380

Query: 393 YYAPETMKYLDLDLVSHVSRFETDARGKPSATRVHIEPGLKIPFSNTWGNWTTEARVLGT 452
           Y + + +  L+       + FE   + + +ATR+H++P L +P     G+ T+E  +L T
Sbjct: 381 YRSQDLLNTLEFSFFGEATNFEHKEQDQVTATRLHLQPTLSLPIHGPAGSLTSELTLLQT 440

Query: 453 -YYQQDLDKTTDAKLEESVTRVIPEIRSVAGIVLERDTVLL-DDYTQTLEPKIQYLYVPE 510
            Y+Q++ D   D++L  SV+R +P  +    I LER+T  L + Y QTLEP++QYLYV  
Sbjct: 441 NYWQRNTDLMPDSELNSSVSRTLPRAKVHGQINLERNTQWLGESYRQTLEPQVQYLYVGY 500

Query: 511 KYQDNIGLYDSTLLQTDYYGLFRSRKYSGVDRIESANQVSYGASTRFFDSNYKERLNIAF 570
           + QD+IG+YDS  LQ DYYGLFR+R++SG+DRI  ANQ++ G +TRFFD   +E+   + 
Sbjct: 501 EDQDDIGIYDSARLQDDYYGLFRARRFSGLDRISDANQLTLGLTTRFFDDRNQEQFKFSL 560

Query: 571 GQIFYL-DSKLNPSNKNPDSTSDKTSYSAWAVEMDFNFADYLFYHGGIQYDIDSQAVQLG 629
           GQI Y  +SK++ +        ++ S SA A E+D +  +  ++ G +QYD  ++  +  
Sbjct: 561 GQILYFSESKVSLTE---GIAEERPSSSAIAAELDAHLYEDWYFSGALQYDARTRDNKKS 617

Query: 630 NSTLEYRV-ASGYIQANYRYVAKDYIRNTVGDSITNIDDITRDGISQAGILAGYQLSRKW 688
             TL+YR      +Q +YRYV  D +     + +         GISQAG+   + L+   
Sbjct: 618 EFTLDYRPGGEKLVQFSYRYV-PDLVNTNTNEEV---------GISQAGMRTTWPLTDSL 667

Query: 689 SASGQYYYDLTTDEALEWLANLTYTSDCWYVGFTYSNQLKSWNGNFVTDPYATPIYENNF 748
              G +YYDL    ++E      Y S CW V  +Y  ++K+   N+  D    P+ +N  
Sbjct: 668 YFVGNWYYDLNESRSVEAYTGFQYESCCWAVRLSYHYRIKT---NY--DDDFNPVQDNRE 722

Query: 749 SFNIGI-IGFGTSIGAGSSMTGVDSAGNS--LGYGRPFFLNN 787
            F  G+ + F      GS   GV    +     Y +P +L N
Sbjct: 723 LFESGVYLNFVIKGLGGSGPMGVSDMLDEGLFNYRKPLYLRN 764