Pairwise Alignments

Query, 787 a.a., LPS assembly protein LptD from Vibrio cholerae E7946 ATCC 55056

Subject, 761 a.a., LPS-assembly protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  172 bits (435), Expect = 8e-47
 Identities = 160/682 (23%), Positives = 277/682 (40%), Gaps = 33/682 (4%)

Query: 51  EPTNPGQQP-INVEADKLEAINGQKATYSGNVVVVQGKKRIAADNVTLHQQENVVVAEGN 109
           +P     +P I+  AD + A      +  G+  + +    +  D +      +   A GN
Sbjct: 41  QPMRAEDRPAISAFADSVTATTDTDVSLKGHAQLRRDVSIVKGDALHYDVDVDKADAYGN 100

Query: 110 VQF-SDGEIKTHSTKATNHLNTDEMTLENTRYQFLCEPGRGEAVYVSKTGKAVYEIEDGS 168
           VQ   DG +      A  +++ +E  +   +Y+F    G G A  +    K    +  G+
Sbjct: 101 VQLVRDGNVFA-GPDAHFYVDANEGYISVPKYRFHLTGGWGSARRIDLVDKERSVVHHGT 159

Query: 169 ITSCP-DGDNAWRMRASSIDVDQNEEIATFYNPRLEVQNVPVFYLPYLTVPIGDTRKTGF 227
            ++C  +   AW + AS  D+D   +    +N  L  Q +P+   P+L+ P+   R++G 
Sbjct: 160 YSTCQCESQPAWYVNASEFDIDTGTDEGIAHNGVLFFQGIPLLASPWLSFPLSGARRSGL 219

Query: 228 LYPTASYGSRNGYSFEVPIYWNLAPQYDLETTFNYMQKRGTQLNSVFRYLTDFGAGQIKS 287
           L PT S  S NG    +P Y+NLAP YDL  T   M +RG  L + +RYL    +G +  
Sbjct: 220 LPPTFSMSSTNGVDVALPYYFNLAPNYDLTLTPRVMTRRGAMLTADYRYLRPNDSGSLSV 279

Query: 288 EYLADDQLHTELGDRWAFQYEHNGIFQQAWKFEIDYSKVSDINYFSDLDSGVGNREDGQL 347
            +L  D +      R++   + N  F   +   ++Y++VSD    +DL SGV        
Sbjct: 280 AFLPHDAITRT--QRYSIALKDNWSFGSGFGAYVNYNRVSDSTVVTDLASGVAFPTGSTT 337

Query: 348 I--QEGRATYRSDNWDSALLVRDFQLLTKDTTSTNLPYRLMPQLSYNYYAPETMKYLDLD 405
           +  QE   TY    W      + +Q  + D+T     Y   PQ++   YA   +   D+ 
Sbjct: 338 LYQQEAGLTYSDGPWTVLAREQRWQSFSSDST-----YNREPQVNVR-YARYNVAGFDIG 391

Query: 406 LVSHVSRFETDARGKPSATRVHIEPGLKIPFSNT-WGNWTTEARVLGTYYQQDLDKTTDA 464
             +  +RF   +       R    P +  P     W      A     Y    +     A
Sbjct: 392 AEADATRFTISSSDMTQGNRFVFNPYVSYPIERPGWFITPKLAWHFAAYDLTSIGSDVPA 451

Query: 465 KLEESVTRVIPEIRSVAGIVLERDTVLL-DDYTQTLEPKIQYLYVPEKYQDNIGLYDSTL 523
              +S +  +P     +G+  ER   L    Y QTLEP++ Y+Y P + Q  + L+D+  
Sbjct: 452 GEPKSFSVNVPTFSLDSGMRFERSVRLFGQSYIQTLEPRLFYVYTPYRNQSYVPLFDTAT 511

Query: 524 LQTDYYGLFRSRKYSGVDRIESANQVSYGASTRFFDS-NYKERLNIAFGQIFYLDSKLNP 582
                  LF +  + G DR+  AN+ +   +TRF D  + +ER      + +  D +   
Sbjct: 512 ADFGLAELFMANSFVGNDRVSDANRATAALTTRFIDPVSGEERARFVLAEQY--DFRTPR 569

Query: 583 SNKNPDSTSDKTSYSAWAVEMDFNFADYLFYHGGIQYDIDSQAVQLGNSTLEYRVAS-GY 641
                D      + +   +   +     L     ++Y   SQA    N  L +  A  G+
Sbjct: 570 VTLQSDDAISTVARTGIILGASYKVGPNLSAEQAVEY---SQA----NHYLTHAEAGFGW 622

Query: 642 IQANYRYVAKDYIRNTVGDSITNIDDITRDGISQAGILAGYQLSRKWSASGQYYYDLTTD 701
               ++ +   Y R T  +S  +        ++Q  +   + L+R   +  +  YD++T 
Sbjct: 623 APGAHQVLNVAY-RYTRANSTLDYQP-----VNQFIVSGQWPLARNVVSVARVNYDMSTH 676

Query: 702 EALEWLANLTYTSDCWYVGFTY 723
             +  L  + Y +DCW  G  +
Sbjct: 677 RLIAGLLGVQYDADCWSFGVAF 698