Pairwise Alignments

Query, 431 a.a., chaperone SurA from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) from Pseudomonas fluorescens FW300-N2E2

 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 101/424 (23%), Positives = 186/424 (43%), Gaps = 52/424 (12%)

Query: 8   LISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSAL-----KTIKANAKQNKQPL 62
           +I  L ALT F+A  +     + A  VN   I Q+++  A+     + ++   K     L
Sbjct: 20  VIVALMALTGFDAIFQATTNSNDAAKVNGEKISQNELSQAVDMQRRQLMQQLGKDFDASL 79

Query: 63  PQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAI---KEIAKNNQQTQEQLIAS 119
             E +LR+  L+ LI   L  Q A        +  L++ I    E   + + + E+    
Sbjct: 80  LDEKMLRDSALKGLIDRKLLLQGAHDAKFAFSEAALDQVILQTPEFQVDGKFSAERFDQV 139

Query: 120 VAQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETD-ATVQYKI 178
           + Q G +  +FR+ + +EM     R  L      +  A+V   A L  Q  D AT+  K 
Sbjct: 140 IRQLGYSRMQFRQMLAQEMLIGQLRAGLAGSGF-VTDAQVLAFARLEKQTRDFATLNIKA 198

Query: 179 SHIQLRVDDGQDKSTAETLANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEM 238
               +++ D + K+  +  A + +   +   D+ ++  A                     
Sbjct: 199 DPASVKLTDDEVKAYYDQHAKEFMTPDQVVIDYLELKKAS-------------------- 238

Query: 239 PTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSD 298
              F DQ+ ++++       ++     I  + + +           A HILI+    +++
Sbjct: 239 ---FFDQVSVKDED-----LQAAYQKEIANLSEQR----------RAAHILIEVNDKVTE 280

Query: 299 EGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKHQIETL 358
             A+ ++ E   R+  GE +F  LA+++SQDPGSA   G+LGY  P +Y PEF+  +  L
Sbjct: 281 AQAKAKIEEIQARLAKGE-SFEALAKEFSQDPGSANNGGDLGYAGPGVYDPEFEKALYAL 339

Query: 359 PVGQISEPFKTVHGWHIVEVL--DRREVDRTDSALKNKAYRILFNRKFNEEASAWLQELR 416
              Q+S P +T  G H++++L  +  EV  T ++LK+K  R L  ++  +      ++L 
Sbjct: 340 NKDQVSAPVRTDFGLHLIKLLGIEAPEVP-TFASLKDKLTRELKTQQVEQRFVEATKQLE 398

Query: 417 ASAF 420
            ++F
Sbjct: 399 DASF 402



 Score = 44.7 bits (104), Expect = 8e-09
 Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 6/151 (3%)

Query: 175 QYKISHIQLRVDDGQDKSTAETLANKLVNDLRNGADFAQMAYAYSKGP-KALQGGDWGWM 233
           Q + +HI + V+D   ++ A+    ++   L  G  F  +A  +S+ P  A  GGD G+ 
Sbjct: 264 QRRAAHILIEVNDKVTEAQAKAKIEEIQARLAKGESFEALAKEFSQDPGSANNGGDLGYA 323

Query: 234 RKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPT 293
                   F   +   NK  +  P R+  G H++K+  ++  E      +       K T
Sbjct: 324 GPGVYDPEFEKALYALNKDQVSAPVRTDFGLHLIKLLGIEAPEVPTFASLKD-----KLT 378

Query: 294 IILSDEGAQKQLNEFVQRIKNGEVTFAELAQ 324
             L  +  +++  E  +++++     ++LAQ
Sbjct: 379 RELKTQQVEQRFVEATKQLEDASFEASDLAQ 409