Pairwise Alignments

Query, 431 a.a., chaperone SurA from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., PpiC-type peptidyl-prolyl cis-trans isomerase (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (268), Expect = 6e-28
 Identities = 93/402 (23%), Positives = 167/402 (41%), Gaps = 27/402 (6%)

Query: 30  VAVIVNSGVILQSDVDSALKTIKANAKQNKQPLPQETVLREQVLEKLIIDTLQQQEADRI 89
           +A +VN   +   D+++ +  + A       P  ++  L  Q+L  LI +TL+ QEA R 
Sbjct: 60  IAAVVNEDAVSLYDLNARIDIVMATGGMPNSPEVRQR-LAPQILRALIDETLKIQEAKRA 118

Query: 90  GVKIDDNRLNEAIKEIAKNNQQTQEQLIASVAQEGLTYPEFREQVRKEMAASDARNALVR 149
            V +    +N  I+ + + N+     L  +    GL       Q+R E+    A  + + 
Sbjct: 119 NVTVSTEDINGGIERLERQNKLPPGGLEKAFKAAGLDQQSLIHQIRAELGWIKAVQSTLG 178

Query: 150 RRINILPAEVDTLAELLAQETDATVQYKISHIQLRVDDGQDKSTAETLANKLVNDLRNGA 209
            R+N+   E+    + L Q      +Y ++ I L VD+    +   T A +++  +R GA
Sbjct: 179 PRVNVSEDEISLYQQNL-QRNLGKPEYLVADIFLPVDNAAQDAEVLTAAQRMIEQMRLGA 237

Query: 210 DFAQMAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKI 269
           +FA +A  +S+GP A +GGD GW+   E+       +     G++  P R+  G+HIL +
Sbjct: 238 NFAALAQQFSRGPAAQRGGDLGWVGPGEIDAEVLQALGAMAPGNLSQPIRTFGGYHILLL 297

Query: 270 DDVKGLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQD 329
            D +      +    A  +L    I++   G +    E +  ++   +      + +   
Sbjct: 298 RDQR------IASGGASSLLKMSRIVIPLRGPRMPTPERLADLRQ-RIAATRSCEAFDAL 350

Query: 330 PGSAA-QKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREV---- 384
            G      G +G   P     E ++ I  LP GQ S P            +D  E+    
Sbjct: 351 AGEVGPPSGSMGSIDPARLPAEAQNVIRDLPAGQPSTPL----------TMDNAEIRLMI 400

Query: 385 -DRTDSALKNK--AYRILFNRKFNEEASAWLQELRASAFVEV 423
            DR    L  +      L  +K    A   L++LR  A +++
Sbjct: 401 CDRPTGGLPGRDILRERLIEQKLQNLAQRRLRDLRQQAIIDI 442