Pairwise Alignments

Query, 431 a.a., chaperone SurA from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., PpiC-type peptidyl-prolyl cis-trans isomerase (NCBI) from Rhodospirillum rubrum S1H

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 65/274 (23%), Positives = 109/274 (39%), Gaps = 46/274 (16%)

Query: 14  ALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQ-NKQPLPQETVLREQV 72
           AL LF   A     D V  +VN   +  S V      ++A+  Q    PL    ++ EQ+
Sbjct: 16  ALPLFAGPALAADPDPVVAVVNGADVHLSAVQERFAELQASQPQLGGLPL---AMVYEQL 72

Query: 73  LEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASVAQEGLTYPEFRE 132
           L  ++   L  +   + G+  D         E+     +  ++LIA    +         
Sbjct: 73  LNSVVEAELVTEAGRKAGLANDP--------EVKHRLDRLLDRLIAGAYMQ--------- 115

Query: 133 QVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISHIQLRVDDGQDKS 192
               ++   D  +A V+ R N + AE     E+ A+           HI L  +D     
Sbjct: 116 ----KVVDEDVTDAAVKARYNEMKAEFKPEKEVHAR-----------HILLETEDA---- 156

Query: 193 TAETLANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKG 252
                A   +  +  GADF ++A   S GP A  GGD G+  K+ M   FA+       G
Sbjct: 157 -----AKDAIKKIEGGADFTKLASELSTGPSAQTGGDLGFFTKDRMVAPFAEAAFAMKVG 211

Query: 253 SII-GPFRSGVGFHILKIDDVKGLETVAVTEVNA 285
            +   P ++  G+H++KI++V+      V E+ +
Sbjct: 212 EVSKAPTKTEFGWHVIKIEEVRDTTFPPVEEMES 245



 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 12/103 (11%)

Query: 282 EVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGY 341
           EV+ARHIL      L  E A K   + +++I+ G   F +LA + S  P SA   G+LG+
Sbjct: 143 EVHARHIL------LETEDAAK---DAIKKIEGG-ADFTKLASELSTGP-SAQTGGDLGF 191

Query: 342 QTPDLYVPEFKHQIETLPVGQISE-PFKTVHGWHIVEVLDRRE 383
            T D  V  F      + VG++S+ P KT  GWH++++ + R+
Sbjct: 192 FTKDRMVAPFAEAAFAMKVGEVSKAPTKTEFGWHVIKIEEVRD 234