Pairwise Alignments

Query, 431 a.a., chaperone SurA from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) from Shewanella loihica PV-4

 Score =  378 bits (970), Expect = e-109
 Identities = 189/426 (44%), Positives = 282/426 (66%), Gaps = 3/426 (0%)

Query: 1   MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60
           MK  K  + ++L+      A AE   LD V V +N G++L+S++ + LKT+KANAK   Q
Sbjct: 1   MKPCKQLIFALLTLAMSHGAMAENVPLDRVTVQINEGIVLESEIVNMLKTVKANAKAAGQ 60

Query: 61  PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120
            LP +  LR QV+E+LI+  LQ Q ADRIG+ I D +L++ I+ IAK  + T E +   V
Sbjct: 61  SLPSDKALRTQVIERLIVTRLQLQMADRIGLHIGDLQLDQTIENIAKEQKMTPEMMREKV 120

Query: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180
             EG+++ ++REQ+R+E+   + +   V+RRI + P E+++L +L+ ++    V+Y+I H
Sbjct: 121 EAEGMSWSQYREQLREEITLGEIQRIQVQRRIQVSPQEINSLVKLIEEQGMQQVEYQIGH 180

Query: 181 IQLRVDDGQDKS---TAETLANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEE 237
           I + V +  +      A + AN ++  L++ ADF Q A A S GPKAL+GG W +M   E
Sbjct: 181 ILIEVPNSPNSEQLEAASSRANAVLKRLQDNADFKQTAIASSSGPKALEGGIWDYMNVNE 240

Query: 238 MPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILS 297
           MPT+FA+ +     G IIGP RSG GFHI+K+ D +GL+T  + EV +RHILIKP+ ILS
Sbjct: 241 MPTLFAELLVGAKTGDIIGPVRSGAGFHIIKVMDARGLQTKEIDEVRSRHILIKPSPILS 300

Query: 298 DEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKHQIET 357
           +E A+  L++F  +++ GE  FA LA+QYS+DPGSAA+ GELG+  P +YVP F   +  
Sbjct: 301 EERAKAMLDKFAAQLRRGEADFATLARQYSEDPGSAAKGGELGWADPTVYVPAFAQTLGA 360

Query: 358 LPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQELRA 417
           L + +ISEPF++ HGWHIV++ +RR+ D TD    N+A++++F RKFNEE   WL E+RA
Sbjct: 361 LKINEISEPFRSSHGWHIVQLEERRKTDATDKFNTNRAHQLIFRRKFNEELQNWLDEMRA 420

Query: 418 SAFVEV 423
            A++EV
Sbjct: 421 EAYIEV 426