Pairwise Alignments

Query, 431 a.a., chaperone SurA from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., survival protein surA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  380 bits (977), Expect = e-110
 Identities = 189/426 (44%), Positives = 284/426 (66%), Gaps = 4/426 (0%)

Query: 8   LISVLSALTLFN-AHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQPLPQET 66
           LI  L AL +     A P+ LD VAV +N G++L+S++ + + T+KANAK   Q LP ++
Sbjct: 7   LIFALFALAISQPTMAAPQPLDRVAVQINDGIVLESEITNMIDTVKANAKAANQSLPSDS 66

Query: 67  VLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASVAQEGLT 126
            LR QV+E+LI+  LQ Q ADRIG+ I D +L++AI+ IA+  + T  Q+   +A EG++
Sbjct: 67  ALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMTVAQMQQKIASEGIS 126

Query: 127 YPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISHIQLRVD 186
           + ++REQ+R+E+   + +   V+RRI + P E+  L +L+ ++    V+Y+I HI + V 
Sbjct: 127 FSQYREQLREEITLGEIQRIQVQRRIQVSPQEITGLVKLIQEQGMKDVEYQIGHILIDVP 186

Query: 187 DGQDKSTAETL---ANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPTIFA 243
           +       E     AN ++  L++G DF + A A S GPKAL+GG W +M   EMPT+FA
Sbjct: 187 NNPTSEQLEASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINEMPTLFA 246

Query: 244 DQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEGAQK 303
           + I    KG IIGP ++G GFHI+KI D +GL+T  + EV ARHIL+KP+ ILS++ A+ 
Sbjct: 247 EVINGAKKGDIIGPIKTGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILSEDRAKA 306

Query: 304 QLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKHQIETLPVGQI 363
            L +F+++I++GE  F +LA+QYS+DPGSA + GELG+  P +YVPEF   + +L   QI
Sbjct: 307 MLEQFLKQIRSGEAKFEDLARQYSEDPGSATKGGELGWAEPSIYVPEFAQTLNSLSPDQI 366

Query: 364 SEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQELRASAFVEV 423
           SEPF+T HGWHI ++ +RR+ D TD    N+A++++F RKFNEE   WL E+RA A++EV
Sbjct: 367 SEPFRTTHGWHITQLEERRKTDATDQFNTNRAHQLIFRRKFNEELQNWLDEMRADAYIEV 426

Query: 424 LKDEKD 429
            + E +
Sbjct: 427 FQPESN 432